r4517 - /branches/consistency_tests_1.3/test_suite/unit_tests/value_testing_base.py

Author: semor Date: Tue Jan 8 23:39:16 2008 New Revision: 4517 URL: http://svn.gna.org/viewcvs/relax?rev=4517&view=rev Log: dapted, for the consistency_tests code, 5 more RSDM unit tests for the setting of parameters. Modified: branches/consistency_tests_1.3/test_suite/unit_tests/value_tes

r4518 - /branches/consistency_tests_1.3/test_suite/unit_tests/value_testing_base.py

Author: semor Date: Tue Jan 8 23:50:42 2008 New Revision: 4518 URL: http://svn.gna.org/viewcvs/relax?rev=4518&view=rev Log: Adapted, for the consistency_tests code, 2 more RSDM unit tests for the setting of parameters. Modified: branches/consistency_tests_1.3/test_suite/unit_tests/value_te

r4516 - /branches/consistency_tests_1.3/test_suite/unit_tests/value_testing_base.py

Author: semor Date: Tue Jan 8 23:34:52 2008 New Revision: 4516 URL: http://svn.gna.org/viewcvs/relax?rev=4516&view=rev Log: Adapted, for the consistency_tests code, 4 more RSDM unit tests for the setting of parameters. Modified: branches/consistency_tests_1.3/test_suite/unit_tests/value_te

r4515 - /branches/consistency_tests_1.3/test_suite/unit_tests/value_testing_base.py

Author: semor Date: Tue Jan 8 23:28:29 2008 New Revision: 4515 URL: http://svn.gna.org/viewcvs/relax?rev=4515&view=rev Log: Adapted, for the consistency_tests code, 5 more RSDM unit tests for the setting of parameters. Modified: branches/consistency_tests_1.3/test_suite/unit_tests/value_te

r4514 - /branches/consistency_tests_1.3/test_suite/unit_tests/value_testing_base.py

Author: semor Date: Tue Jan 8 23:16:21 2008 New Revision: 4514 URL: http://svn.gna.org/viewcvs/relax?rev=4514&view=rev Log: Corrected a typo. Modified: branches/consistency_tests_1.3/test_suite/unit_tests/value_testing_base.py Modified: branches/consistency_tests_1.3/test_suite/unit_tests

r4513 - /branches/consistency_tests_1.3/test_suite/unit_tests/value_testing_base.py

Author: semor Date: Tue Jan 8 23:11:06 2008 New Revision: 4513 URL: http://svn.gna.org/viewcvs/relax?rev=4513&view=rev Log: Adapted, for the consistency_tests code, 3 more RSDM unit tests for the setting of parameters. Modified: branches/consistency_tests_1.3/test_suite/unit_tests/value_te

r4512 - /branches/consistency_tests_1.3/test_suite/unit_tests/value_testing_base.py

Author: semor Date: Tue Jan 8 22:25:13 2008 New Revision: 4512 URL: http://svn.gna.org/viewcvs/relax?rev=4512&view=rev Log: Adapted, for the consistency_tests code, 2 more RSDM unit tests for the setting of parameters. Modified: branches/consistency_tests_1.3/test_suite/unit_tests/value_te

r4511 - /branches/consistency_tests_1.3/test_suite/unit_tests/value_testing_base.py

Author: semor Date: Tue Jan 8 22:15:07 2008 New Revision: 4511 URL: http://svn.gna.org/viewcvs/relax?rev=4511&view=rev Log: Corrected a few typos in the new unit tests for consistency testing. Modified: branches/consistency_tests_1.3/test_suite/unit_tests/value_testing_base.py Modified: b

r4510 - /branches/consistency_tests_1.3/test_suite/unit_tests/value_testing_base.py

Author: semor Date: Tue Jan 8 22:08:48 2008 New Revision: 4510 URL: http://svn.gna.org/viewcvs/relax?rev=4510&view=rev Log: Adapted, for the consistency_tests code, 5 more RSDM unit tests for the setting of parameters. Modified: branches/consistency_tests_1.3/test_suite/unit_tests/value_te

r4509 - /branches/consistency_tests_1.3/test_suite/unit_tests/value_testing_base.py

Author: semor Date: Tue Jan 8 21:32:29 2008 New Revision: 4509 URL: http://svn.gna.org/viewcvs/relax?rev=4509&view=rev Log: Adapted, to the consistency_tests code, 3 RSDM unit tests for the setting of parameters. Modified: branches/consistency_tests_1.3/test_suite/unit_tests/value_testing_

r4508 - /branches/consistency_tests_1.3/specific_fns/consistency_tests.py

Author: semor Date: Tue Jan 8 21:12:11 2008 New Revision: 4508 URL: http://svn.gna.org/viewcvs/relax?rev=4508&view=rev Log: Removed remnants of the 1.2 line code. These were pointed out by a post by Edward d'Auvergne : https://mail.gna.org/public/relax-devel/2008-01/msg00012.html (Message-id: <[

r4507 - /branches/consistency_tests_1.3/specific_fns/consistency_tests.py

Author: semor Date: Tue Jan 8 20:28:47 2008 New Revision: 4507 URL: http://svn.gna.org/viewcvs/relax?rev=4507&view=rev Log: Replaced a tab character with spaces. Modified: branches/consistency_tests_1.3/specific_fns/consistency_tests.py Modified: branches/consistency_tests_1.3/specific_fns

r4506 - /branches/consistency_tests_1.3/specific_fns/consistency_tests.py

Author: semor Date: Tue Jan 8 20:04:57 2008 New Revision: 4506 URL: http://svn.gna.org/viewcvs/relax?rev=4506&view=rev Log: Corrected a line alignment in a docstring. Modified: branches/consistency_tests_1.3/specific_fns/consistency_tests.py Modified: branches/consistency_tests_1.3/specifi

r4505 - /branches/consistency_tests_1.3/specific_fns/consistency_tests.py

Author: semor Date: Tue Jan 8 19:59:38 2008 New Revision: 4505 URL: http://svn.gna.org/viewcvs/relax?rev=4505&view=rev Log: Placed back the 'orientation' and 'tc' values in the Ct default_value() method. This change was proposed by Edward d'Auvergne in the following post: https://mail.gna.org/pu

r4504 - /branches/consistency_tests_1.3/physical_constants.py

Author: semor Date: Tue Jan 8 19:49:51 2008 New Revision: 4504 URL: http://svn.gna.org/viewcvs/relax?rev=4504&view=rev Log: Reverting the r4469 changes. The command used was: svn merge -r4469:4468 . The 'orientation' and 'tc' values are to be placed directly in the consistency_tests code and n

r4503 - /branches/N_state_model/maths_fns/rotation_matrix.py

Author: bugman Date: Tue Jan 8 18:03:02 2008 New Revision: 4503 URL: http://svn.gna.org/viewcvs/relax?rev=4503&view=rev Log: Wrote a function to calculate a z-y-z rotation matrix given the Euler angles. This is required as part of the target function for the N-state model. Added: branches/

r4502 - in /branches/N_state_model: maths_fns/n_state_model.py specific_fns/n_state_model.py

Author: bugman Date: Tue Jan 8 17:27:35 2008 New Revision: 4502 URL: http://svn.gna.org/viewcvs/relax?rev=4502&view=rev Log: Renamed the class containing the target function from N_state_model to N_state_opt. The name N_state_model was clashing with the class N_state_model of the specific_fns.

r4501 - /branches/N_state_model/specific_fns/n_state_model.py

Author: bugman Date: Tue Jan 8 17:23:21 2008 New Revision: 4501 URL: http://svn.gna.org/viewcvs/relax?rev=4501&view=rev Log: Added the missing import of minimise.generic.generic_minimise(). Modified: branches/N_state_model/specific_fns/n_state_model.py Modified: branches/N_state_model/spec

r4500 - /branches/N_state_model/specific_fns/n_state_model.py

Author: bugman Date: Tue Jan 8 17:22:29 2008 New Revision: 4500 URL: http://svn.gna.org/viewcvs/relax?rev=4500&view=rev Log: Switched from the call to match() to search(). Modified: branches/N_state_model/specific_fns/n_state_model.py Modified: branches/N_state_model/specific_fns/n_state_m

r4499 - /branches/N_state_model/specific_fns/n_state_model.py

Author: bugman Date: Tue Jan 8 17:21:32 2008 New Revision: 4499 URL: http://svn.gna.org/viewcvs/relax?rev=4499&view=rev Log: Fixed up the minimise() method to use the target function framework properly. Modified: branches/N_state_model/specific_fns/n_state_model.py Modified: branches/N_sta

r4498 - /branches/N_state_model/maths_fns/n_state_model.py

Author: bugman Date: Tue Jan 8 17:17:43 2008 New Revision: 4498 URL: http://svn.gna.org/viewcvs/relax?rev=4498&view=rev Log: Added the basic framework for the N-state model target function. Added: branches/N_state_model/maths_fns/n_state_model.py Added: branches/N_state_model/maths_fns/n_s

r4497 - /branches/N_state_model/specific_fns/n_state_model.py

Author: bugman Date: Tue Jan 8 17:04:54 2008 New Revision: 4497 URL: http://svn.gna.org/viewcvs/relax?rev=4497&view=rev Log: Added the basic code for implementing optimisation of the N-state model. The target function, the maths_fns code, doesn't yet exist though. Modified: branches/N_stat

r4496 - in /branches/consistency_tests_1.3: ./ docs/ prompt/ test_suite/system_tests/ test_suite/system_tests/scripts/

Author: semor Date: Tue Jan 8 16:57:37 2008 New Revision: 4496 URL: http://svn.gna.org/viewcvs/relax?rev=4496&view=rev Log: Merged revisions 4476,4481-4493 via svnmerge from svn+ssh://[EMAIL PROTECTED]/svn/relax/1.3 r4476 | bugman | 2008-01-08 03:50:10 -0500 (Tue, 08 Jan 2008) | 3 li

r4495 - /branches/N_state_model/specific_fns/n_state_model.py

Author: bugman Date: Tue Jan 8 16:41:14 2008 New Revision: 4495 URL: http://svn.gna.org/viewcvs/relax?rev=4495&view=rev Log: Added the __docformat__ variable to the return_data_name() method. Modified: branches/N_state_model/specific_fns/n_state_model.py Modified: branches/N_state_model/sp

r4494 - in /branches/N_state_model: ./ docs/ prompt/ test_suite/system_tests/ test_suite/system_tests/scripts/

Author: bugman Date: Tue Jan 8 16:36:37 2008 New Revision: 4494 URL: http://svn.gna.org/viewcvs/relax?rev=4494&view=rev Log: Merged revisions 4461-4493 via svnmerge from svn+ssh://[EMAIL PROTECTED]/svn/relax/1.3 r4461 | semor | 2008-01-07 18:58:13 +0100 (Mon, 07 Jan 2008) | 3 lines

r4493 - /1.3/prompt/interpreter.py

Author: bugman Date: Tue Jan 8 16:24:17 2008 New Revision: 4493 URL: http://svn.gna.org/viewcvs/relax?rev=4493&view=rev Log: Updated the runcode() docstring for the epydoc format. Modified: 1.3/prompt/interpreter.py Modified: 1.3/prompt/interpreter.py URL: http://svn.gna.org/viewcvs/relax

r4492 - /1.3/prompt/interpreter.py

Author: bugman Date: Tue Jan 8 16:22:58 2008 New Revision: 4492 URL: http://svn.gna.org/viewcvs/relax?rev=4492&view=rev Log: Converted the default quit arg of run_script() to a bool. Modified: 1.3/prompt/interpreter.py Modified: 1.3/prompt/interpreter.py URL: http://svn.gna.org/viewcvs/re

r4491 - /1.3/prompt/interpreter.py

Author: bugman Date: Tue Jan 8 16:22:33 2008 New Revision: 4491 URL: http://svn.gna.org/viewcvs/relax?rev=4491&view=rev Log: Updated the run_script() docstring for the epydoc format. Modified: 1.3/prompt/interpreter.py Modified: 1.3/prompt/interpreter.py URL: http://svn.gna.org/viewcvs/re

r4490 - /1.3/prompt/interpreter.py

Author: bugman Date: Tue Jan 8 16:21:23 2008 New Revision: 4490 URL: http://svn.gna.org/viewcvs/relax?rev=4490&view=rev Log: Updated the prompt() docstring for the epydoc format. Modified: 1.3/prompt/interpreter.py Modified: 1.3/prompt/interpreter.py URL: http://svn.gna.org/viewcvs/relax/

r4489 - /1.3/prompt/interpreter.py

Author: bugman Date: Tue Jan 8 16:19:57 2008 New Revision: 4489 URL: http://svn.gna.org/viewcvs/relax?rev=4489&view=rev Log: Updated the interact_script() docstring for the epydoc format. Modified: 1.3/prompt/interpreter.py Modified: 1.3/prompt/interpreter.py URL: http://svn.gna.org/viewc

r4487 - in /1.3: prompt/interpreter.py relax

Author: bugman Date: Tue Jan 8 15:36:16 2008 New Revision: 4487 URL: http://svn.gna.org/viewcvs/relax?rev=4487&view=rev Log: prompt.interpreter.interact_script() has been modified to allow RelaxErrors to be raised. Previously running a script would catch the error, send a nice message to STDER

r4488 - /1.3/prompt/interpreter.py

Author: bugman Date: Tue Jan 8 15:42:44 2008 New Revision: 4488 URL: http://svn.gna.org/viewcvs/relax?rev=4488&view=rev Log: Converted the interact_prompt() args to keyword args and epydoc'd the docstring. Modified: 1.3/prompt/interpreter.py Modified: 1.3/prompt/interpreter.py URL: http:/

r4486 - /1.3/prompt/interpreter.py

Author: bugman Date: Tue Jan 8 15:26:28 2008 New Revision: 4486 URL: http://svn.gna.org/viewcvs/relax?rev=4486&view=rev Log: The status of script execution is now returned by the run() interpreter method. Nothing currently uses this. Modified: 1.3/prompt/interpreter.py Modified: 1.3/promp

r4485 - /1.3/prompt/interpreter.py

Author: bugman Date: Tue Jan 8 15:18:10 2008 New Revision: 4485 URL: http://svn.gna.org/viewcvs/relax?rev=4485&view=rev Log: Tidied up the interact_script() function (with comments). The function also returns its status. The status is obviously only returned if relax doesn't not quit. Modifi

r4484 - /1.3/test_suite/system_tests/model_free.py

Author: bugman Date: Tue Jan 8 14:51:52 2008 New Revision: 4484 URL: http://svn.gna.org/viewcvs/relax?rev=4484&view=rev Log: All the model-free optimisation tests now run the opt_setup_S2_0_970_te_2048_Rex_0_149.py script. Modified: 1.3/test_suite/system_tests/model_free.py Modified: 1.3/

r4483 - in /1.3/test_suite/system_tests: model_free.py scripts/opt_setup_S2_0_970_te_2048_Rex_0_149.py

Author: bugman Date: Tue Jan 8 14:47:15 2008 New Revision: 4483 URL: http://svn.gna.org/viewcvs/relax?rev=4483&view=rev Log: Converted all of the opt_setup_S2_0_970_te_2048_Rex_0_149() set up function into its own script. Added: 1.3/test_suite/system_tests/scripts/opt_setup_S2_0_970_te_204

r4482 - /1.3/prompt/interpreter.py

Author: bugman Date: Tue Jan 8 14:31:18 2008 New Revision: 4482 URL: http://svn.gna.org/viewcvs/relax?rev=4482&view=rev Log: Bug fix: Removed the 'quit' keyword arg from the call of the prompt() function. The relax prompt is back again! Modified: 1.3/prompt/interpreter.py Modified: 1.3/p

r4481 - in /1.3/test_suite/system_tests: model_free.py scripts/opendx_s2_te_rex.py

Author: bugman Date: Tue Jan 8 14:29:05 2008 New Revision: 4481 URL: http://svn.gna.org/viewcvs/relax?rev=4481&view=rev Log: Shifted the contents of the test_opendx_s2_te_rex() system test into its own script. Added: 1.3/test_suite/system_tests/scripts/opendx_s2_te_rex.py Modified: 1.3

r4480 - in /1.2: ./ docs/COMMITTERS

Author: bugman Date: Tue Jan 8 10:23:57 2008 New Revision: 4480 URL: http://svn.gna.org/viewcvs/relax?rev=4480&view=rev Log: Merged revisions 4476 via svnmerge from svn+ssh://[EMAIL PROTECTED]/svn/relax/1.3 r4476 | bugman | 2008-01-08 09:50:10 +0100 (Tue, 08 Jan 2008) | 3 lines

r4479 - /1.2/

Author: bugman Date: Tue Jan 8 10:07:09 2008 New Revision: 4479 URL: http://svn.gna.org/viewcvs/relax?rev=4479&view=rev Log: Blocked revisions 4146-4175,4223,4241-4253,4255-4262,4264-4270,4272-4274,4276-4291,4293-4295,4297-4298,4300,4302-4305,4307-4335,4338-4372,4374-4398,4402-4419,4424,4426-442

r4478 - in /1.2: ./ relax

Author: bugman Date: Tue Jan 8 09:58:09 2008 New Revision: 4478 URL: http://svn.gna.org/viewcvs/relax?rev=4478&view=rev Log: Merged revisions 4145 via svnmerge from svn+ssh://[EMAIL PROTECTED]/svn/relax/1.3 r4145 | bugman | 2007-12-09 15:09:10 +0100 (Sun, 09 Dec 2007) | 3 lines

r4477 - /1.2/

Author: bugman Date: Tue Jan 8 09:57:40 2008 New Revision: 4477 URL: http://svn.gna.org/viewcvs/relax?rev=4477&view=rev Log: Blocked revisions 4141,4144 via svnmerge r4141 | bugman | 2007-12-09 12:44:13 +0100 (Sun, 09 Dec 2007) | 3 lines Added the message "Copyright (C) 2006-2007

r4476 - /1.3/docs/COMMITTERS

Author: bugman Date: Tue Jan 8 09:50:10 2008 New Revision: 4476 URL: http://svn.gna.org/viewcvs/relax?rev=4476&view=rev Log: Ordered the committers list alphabetically. Modified: 1.3/docs/COMMITTERS Modified: 1.3/docs/COMMITTERS URL: http://svn.gna.org/viewcvs/relax/1.3/docs/COMMITTERS?re