Author: bugman
Date: Fri Nov 23 13:53:55 2007
New Revision: 3841
URL: http://svn.gna.org/viewcvs/relax?rev=3841&view=rev
Log:
Updated the system test of loading a sequence from a PDB file to use the new
relax design.
Modified:
1.3/test_suite/system_tests/sequence.py
Modified: 1.3/test_suite/system_tests/sequence.py
URL:
http://svn.gna.org/viewcvs/relax/1.3/test_suite/system_tests/sequence.py?rev=3841&r1=3840&r2=3841&view=diff
==============================================================================
--- 1.3/test_suite/system_tests/sequence.py (original)
+++ 1.3/test_suite/system_tests/sequence.py Fri Nov 23 13:53:55 2007
@@ -51,14 +51,14 @@
self.test = self.pdb
- def pdb(self, run):
+ def pdb(self, pipe):
"""The sequence loading from a PDB file test."""
- # Create the run.
- self.relax.generic.runs.create(run, 'mf')
+ # Create the data pipe.
+ self.relax.interpreter._Pipe.create(pipe, 'mf')
# Read the sequence.
- self.relax.interpreter._Structure.read_pdb(run, file='test.pdb',
dir=sys.path[-1] + '/test_suite/system_tests/data', model=1, load_seq=1)
+ self.relax.interpreter._Structure.read_pdb(file='test.pdb',
dir=sys.path[-1] + '/test_suite/system_tests/data', model=1, load_seq=1)
# Success.
return 1
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