Full analysis issue

2008-05-05 Thread Sébastien Morin
Hi, I am currently using relax with the full_analysis.py script. I face several problems for which I can't find any solution... 1. With all my data (230 residues at 3 fields, for a total of 2070 observables), the best diffusion model is the local tm. This is not normal as this protein is globula

Re: Full analysis issue

2008-05-07 Thread Edward d'Auvergne
Hi, I've been thinking about this one for a while, but I don't know exactly what the problem is. I have a few ideas that may help though. This could either be some type of interesting dynamics, or be caused by something a bit more sobering. Firstly though, it is worth comparing the local tm mod

Re: Full analysis issue

2008-05-09 Thread Sébastien Morin
Hi Ed, First, thanks a lot for this help ! Second, I have to apologize for the length of this mail... Ok... My system is a 271 residue globular protein (230 residues with data at 3 fields = 2070 observables). An homologous protein is being studied in the lab and analysing relaxation data usin

Re: Full analysis issue

2008-05-09 Thread Edward d'Auvergne
Hi, The help wasn't a problem, and don't worry about the length of the message - the details will be very useful. Unfortunately you may need to wait a little while as I'll be taking holidays for a week or so, starting in 5 minutes time. I'll have to look at the details after that. Regards, Edw

Re: Full analysis issue

2008-05-09 Thread Sébastien Morin
Hi Ed, Fine ! That'll give me time to think a bit more about all that... Cheers ! Séb :) Edward d'Auvergne wrote: > Hi, > > The help wasn't a problem, and don't worry about the length of the > message - the details will be very useful. Unfortunately you may need > to wait a little while a

Re: Full analysis issue

2008-05-27 Thread Edward d'Auvergne
On Fri, May 9, 2008 at 5:45 PM, Sébastien Morin <[EMAIL PROTECTED]> wrote: > Hi Ed, > > First, thanks a lot for this help ! > > Second, I have to apologize for the length of this mail... > > > Ok... > > > My system is a 271 residue globular protein (230 residues with data at 3 > fields = 2070 obser