Github user sun-rui commented on the pull request:
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@shivaram , tests done. Also tested with YARN cluster, yarn-client,
standalone, createDataFrame() in YARN client mode.
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Github user shivaram commented on the pull request:
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Thanks @sun-rui - LGTM. Merging this
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@sun-rui Could you close this PR ? Looks like Github PRs are not being
closed due to an infrastructure issue
https://issues.apache.org/jira/browse/INFRA-9988
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@shivaram, close the PR.
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Github user andrewor14 commented on the pull request:
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@sun-rui could you rebase this? There are conflicts now. @shivaram does the
R side look good to you? If so feel free to merge it.
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Yeah R code looks fine to me. However as this changes some fundamental
things with how we locate the package, @sun-rui it will be great if you could
confirm the two or
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The unit test failure:
[info] - Single command with -e *** FAILED *** (2 minutes, 18 seconds)
[info] java.util.concurrent.TimeoutException: Futures timed out
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Jenkins, retest this please
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Jenkins, retest this please
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Github user andrewor14 commented on a diff in the pull request:
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--- Diff: project/MimaExcludes.scala ---
@@ -81,6 +81,10 @@ object MimaExcludes {
org.apache.spark.mllib.linalg.Matrix.numNonzeros),
Github user andrewor14 commented on the pull request:
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@sun-rui OK not a problem. I think this is ready to go once it passes
tests. LGTM!
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rebased
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Github user sun-rui commented on the pull request:
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@andrewor14, I did a modification on your proposed code because when
sparkRPackagePath() is called on executors, Most of the Spark conf properties
can't be accessed
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Github user andrewor14 commented on the pull request:
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@sun-rui you could just copy and paste the error message in the test output
to `MimaExcludes`. For instance, you should add the following line there:
```
Github user shivaram commented on the pull request:
https://github.com/apache/spark/pull/6743#issuecomment-118910150
BTW if we are changing the RRDD constructor we should add a MimaExcludes
for it to make the tests pass. @andrewor14 or @davies can probably give more
information about
Github user andrewor14 commented on a diff in the pull request:
https://github.com/apache/spark/pull/6743#discussion_r33700035
--- Diff: core/src/main/scala/org/apache/spark/api/r/RUtils.scala ---
@@ -0,0 +1,55 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF)
Github user andrewor14 commented on a diff in the pull request:
https://github.com/apache/spark/pull/6743#discussion_r33702574
--- Diff: core/src/main/scala/org/apache/spark/api/r/RUtils.scala ---
@@ -0,0 +1,44 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF)
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--- Diff: core/src/main/scala/org/apache/spark/deploy/SparkSubmit.scala ---
@@ -339,6 +341,23 @@ object SparkSubmit {
}
}
+
Github user andrewor14 commented on a diff in the pull request:
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--- Diff: core/src/main/scala/org/apache/spark/deploy/SparkSubmit.scala ---
@@ -339,6 +341,23 @@ object SparkSubmit {
}
}
+
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--- Diff: core/src/main/scala/org/apache/spark/api/r/RUtils.scala ---
@@ -0,0 +1,55 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF)
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--- Diff: core/src/main/scala/org/apache/spark/api/r/RUtils.scala ---
@@ -0,0 +1,55 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF)
Github user andrewor14 commented on the pull request:
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@sun-rui this looks pretty close. I left a suggestion to rewrite a method
for readability, but functionally it looks good. Have you had a chance to test
this on a
Github user felixcheung commented on a diff in the pull request:
https://github.com/apache/spark/pull/6743#discussion_r33654496
--- Diff: core/src/main/scala/org/apache/spark/api/r/RUtils.scala ---
@@ -0,0 +1,55 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF)
Github user shivaram commented on the pull request:
https://github.com/apache/spark/pull/6743#issuecomment-117882360
Not yet -- As a part of #7139 @brkyvz is adding support for installing
Spark packages with R code from source. We can then extend that to install CRAN
R packages as
Github user sun-rui commented on the pull request:
https://github.com/apache/spark/pull/6743#issuecomment-117859704
@andrewor14,
I have tested this patch with a real YARN cluster.
For an R program, it can source other R files and call functions within
them, or it can
Github user sun-rui commented on a diff in the pull request:
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--- Diff: core/src/main/scala/org/apache/spark/api/r/RUtils.scala ---
@@ -0,0 +1,55 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF) under
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--- Diff: core/src/main/scala/org/apache/spark/api/r/RUtils.scala ---
@@ -0,0 +1,55 @@
+/*
+ * Licensed to the Apache Software Foundation (ASF) under
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https://github.com/apache/spark/pull/6743#discussion_r33739229
--- Diff: core/src/main/scala/org/apache/spark/deploy/SparkSubmit.scala ---
@@ -339,6 +341,23 @@ object SparkSubmit {
}
}
+
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Github user AmplabJenkins commented on the pull request:
https://github.com/apache/spark/pull/6743#issuecomment-117101678
Merged build finished. Test FAILed.
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Github user SparkQA commented on the pull request:
https://github.com/apache/spark/pull/6743#issuecomment-117101652
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Github user shivaram commented on the pull request:
https://github.com/apache/spark/pull/6743#issuecomment-117240152
@sun-rui The reason this patch keeps failing the MiMa tests is that we are
modifying the constructor of RRDD which is a Developer API if I am not wrong.
Anyways that
Github user sun-rui commented on a diff in the pull request:
https://github.com/apache/spark/pull/6743#discussion_r33555215
--- Diff: core/src/main/scala/org/apache/spark/deploy/SparkSubmit.scala ---
@@ -339,6 +340,24 @@ object SparkSubmit {
}
}
+
Github user SparkQA commented on the pull request:
https://github.com/apache/spark/pull/6743#issuecomment-117094686
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