After a new build of sage-5.12 from source,
sage -combinat install 
produced:

applying finite_semigroup-nt.patch
patching file sage/monoids/all.py
Hunk #1 FAILED at 20
1 out of 1 hunks FAILED -- saving rejects to file sage/monoids/all.py.rej
patch failed, unable to continue (try -v)
patch failed, rejects left in working dir
errors during apply, please fix and refresh finite_semigroup-nt.patch
Abort

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