I can confirm this problem in sagenb on Safari, ONLY with the
`viewer='jmol'` option in 9.0.beta4 (default renders normally in threejs).
On the other hand, in Jupyter, I didn't even get the little circle that one
usually clicked to make the jmol live, but the right-click menu was there
(thoug
On Tuesday, November 5, 2019 at 7:33:07 AM UTC-5, Eric Gourgoulhon wrote:
>
> Le mardi 5 novembre 2019 11:34:55 UTC+1, Salvatore Stella a écrit :
>>
>> On a side note: is jmol going to be replaced? If so, should we just
>> ignore
>> the issue?
>>
>>
> Jmol has been replaced by three.js as Sage
Hi Dima,
On 2019-11-06, Dima Pasechnik wrote:
> if you look at its spkg-install, you'd see that shd_install is not
> used at some place, instead
>
> make install
>
> is done, something that won't write any JSON files, IMHO...
Good that I leave comments in my code...
The comment says that I used
These shell functions are defined and documented in
SAGE_ROOT/build/bin/sage-dist-helpers. In my opinion they should also be
documented in the developer's guide, but they don't seem to be.
On Thursday, November 7, 2019 at 6:35:05 AM UTC-8, Simon King wrote:
>
> Hi Dima,
>
> On 2019-11-06, Dima
Hi John,
thank you!
So, I'll try sdh_make_install (sdh_install just copies some files), keep
using sdh_pip_install, and check what jason file results.
Best regards,
Simon
On 2019-11-07, John H Palmieri wrote:
> These shell functions are defined and documented in
> SAGE_ROOT/build/bin/sage-dis
Hi Dima,
On 2019-11-06, Dima Pasechnik wrote:
> sdh_install installs a json file into
> SAGE_LOCAL/var/lib/sage/installed/
> which are then used by unistallaller
> ...
> I guess sdh_pip_install does not do this, I don't know.
No, I just checked: Those files of p_group_cohomology that got install
ImportError: /home/tengely/software/sage-8.9/local/lib/liblinbox.so.0:
undefined symbol: GOMP_loop_ull_maybe_nonmonotonic_runtime_next
something went wrong with installing linbox.
please post the relevant log.
On Thu, 7 Nov 2019, 21:01 Sz Tengely, wrote:
> Hi,
>
> I tried to install SageMat
The log file is attached.
On Thursday, November 7, 2019 at 10:08:51 PM UTC+1, Dima Pasechnik wrote:
>
> ImportError: /home/tengely/software/sage-8.9/local/lib/liblinbox.so.0:
> undefined symbol: GOMP_loop_ull_maybe_nonmonotonic_runtime_next
>
>
> something went wrong with installing linbox.
>
>
this seems to be related to OpenMP.
are you doing anything special related to this?
On Thu, 7 Nov 2019, 21:41 Sz Tengely, wrote:
> The log file is attached.
>
>
> On Thursday, November 7, 2019 at 10:08:51 PM UTC+1, Dima Pasechnik wrote:
>>
>> ImportError: /home/tengely/software/sage-8.9/local/
install.log contains the following:
[sagenb-1.1.2] Exception occurred:
[sagenb-1.1.2] File "sage/misc/lazy_import.pyx", line 218, in
sage.misc.lazy_i
mport.LazyImport._get_object (build/cythonized/sage/misc/lazy_import.c:2502)
[sagenb-1.1.2] raise RuntimeError(f"resolving lazy import {self.
sagenb build error is a red herring here.
the problem is that Sage, needed to build sagenb, does not start.
On Thu, 7 Nov 2019, 21:51 Sz Tengely, wrote:
> install.log contains the following:
>
> [sagenb-1.1.2] Exception occurred:
> [sagenb-1.1.2] File "sage/misc/lazy_import.pyx", line 218, i
What does
ldd /home/tengely/software/sage-8.9/local/lib/liblinbox.so.0
give you? Looks like libgomp used at runtime is older than what is at build
time.
Isuru
On Thu, Nov 7, 2019 at 4:07 PM Dima Pasechnik wrote:
> sagenb build error is a red herring here.
>
> the problem is that Sage, needed
I have a working binary version of SageMath, however I would like to
install a few optional packages via sage -i. That is the reason I go for
this method. Now I found an old post
https://sage-release.narkive.com/Cad5BdS6/sage-8-5-beta3-released in which
a similar issue is mentioned (problem wit
ldd /home/tengely/software/sage-8.9/local/lib/liblinbox.so.0
linux-vdso.so.1 (0x7ffc6d5a9000)
libntl.so.42 => /usr/lib/libntl.so.42 (0x7f3971b4a000)
libflint.so.13 => /usr/lib/libflint.so.13 (0x7f39717db000)
libfflas.so.1 =>
/home/tengely/software/sage-8.9/local/lib
As a test I also tried to install SageMath 8.8 and that went fine.
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> libgcc_s.so.1 => /home/tengely/software/sage-8.9/local/lib/libgcc_s.so.1
> (0x7f39701d4000)
> libgomp.so.1 => /home/tengely/software/sage-8.9/local/lib/libgomp.so.1
> (0x7f39701a4000)
This looks strange. Are you building Sage's gcc for some reason?
(Most probably you're buildin
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