Re: [SIESTA-L] Vibrational frequencies

2005-03-04 Thread Miguel Alonso Pruneda
Notice also, that the dipole of H2O gives a long range contribution to the dynamical matrix that might be behind the **large** negative eigenvalues. What size are you using for the cell? If you increase the size of the cell, the negative values will decrease... though, as Pablo said, they might

Re: [SIESTA-L] Vibrational frequencies

2005-03-04 Thread Pablo Ordejon
This is probably because the rotational invariance is not enforced, and small errors in the forces due to the grid lead to rotational modes having nonzero frequency. (In a molecule, there should be 3 rotational modes which should be zero by rotational invariance symmetry). This should be fixed by

[SIESTA-L] Vibrational frequencies

2005-03-04 Thread BOUYER Frédéric 153746
Dear all, We have calculated the vibrational frequencies of H2O molecule, in a large box (20Ang), and with either a cutoff of 200 and 400 Ry; but we always get a first (or two) negative value (very negative ! ) in addition with the 3 zero-like. Is there any reason because of the periodicity ? I e

Re: [SIESTA-L] Generating WFS files

2005-03-04 Thread Andrei Postnikov
Hi, it is well hidden in the documentation but true: you should activate the block WaveFuncKPoints to make the program really write these coefficients. Good luck, Andrei Postnikov +-- Dr. habil. Andrei Postnikov - Tel. +49-541-969.2377 -- Fax .2351 ---+ | Universitaet Osnabrueck - Fachb

Re: [SIESTA-L] Generating WFS files

2005-03-04 Thread Fedwa El-Mellouhi
In fact according to the manual you need to specify "WaveFuncKPoints", otherwise it doesn't write it. I juste tried it then works fine. as an example add this to your input file %block WaveFuncKPoints 0.000 0.000 0.000 from 1 to 10 # Gamma wavefuncs 1 to 10 2.000 0.000 0.000 1

Re: [SIESTA-L] Generating WFS files

2005-03-04 Thread Fedwa El-Mellouhi
Hi, In the same context, I wanted Wavefuctions for the same tests. Even if I specify "WriteWaveFunctions .true.", the program doesn't provide any *.WFS files. What's wrong ? Fedwa Le 4 mars 05, à 10:22, Mike F. Lisowski a écrit : Hello Everyone, I am trying to run Si in Siesta and wan

[SIESTA-L] Generating WFS files

2005-03-04 Thread Mike F. Lisowski
Hello Everyone, I am trying to run Si in Siesta and want to get the wavefunction files for use with Denchar. I changed the longOutput .true. but I still do not seem to get the WFS files. What am I doing wrong?

[SIESTA-L] eps parameter

2005-03-04 Thread Konstantin Rushchanskii
Dear SIESTA users, I'm trying to construct pseudopotentials for Sb, S and I atoms, using spin-polarized case and exchange-correlation functional in the form, proposed by Ceperley-Alder. The parameters, used for the construction, provide a good transferability and other properties of pseudopotent