Rodrigo Z. Armond a écrit :
Yurko Natanzon,
Thank you very much for your reply.
I search the how-to writed by Sebastien Le Roux and i can compile the siesta
to work parallel.
One more time... thank you very much.
Rod.
On Wednesday 03 October 2007 17:05:39 Yurko Natanzon wrote:
It is
Cherry Y. Yates a écrit :
DEAR Developer,
Do you have any suggestions for compiling a parallel version of SIESTA using
LAM-MPI? I always got the following error messages:
rdiag.o(.text+0x2a77): In function `rdiag_':
: undefined reference to `blacs_gridinit__'
Saswata Bhattacharya a écrit :
dear friends,
Can anybody tell me how to install SIESTA parallely in a INTEL
cluster?please write down the steps I need to do and the Libraries
that I need to installif possible please attach the arch.make file
regards,
Saswata
Yurko Natanzon a écrit :
Dear Sebastien,
thank you for your help. I was confused with mpif90 output and thought
that it didn't work. Now I've recompiled successfully blacs and
scalapack with mpif90/mpicc, but now the siesta compilation fails at
the beginning:
...
make[2]: Entering directory
Yurko Natanzon a écrit :
So I compiled everything with ifort and icc instead of mpif90/mpicc.
Also I use 9.1 version of ifort/icc. Could this be the problem? I
attach my new arch.make together with makefiles of mpich2 and all the
libraries.
Hi dear Yurko Natanzon,
Your arch.make
Hi Rodrigo,
Following your arch.make I can read:
BLAS_LIBS=/usr/local/lib/blas_LINUX.a
LAPACK_LIBS=/usr/local/lib/lapack_LINUX.a
and
GUIDE=/opt/intel/mkl/8.0.1/lib/em64t/libguide.a
LAPACK=/opt/intel/mkl/8.0.1/lib/em64t/libmkl_lapack.a
BLAS=/opt/intel/mkl/8.0.1/lib/em64t/libmkl_em64t.a
You
Dear Vasilii,
I had this problem few weeks ago running CG calculations on GeS2,
I solved it first by checking that all lib and code (lapack, blas,
scalapack, blacs, mpich(c-part, f90-part), siesta)
have been compiled using exactly the same compilation options. If
already done then you may have
SuiYang a écrit :
Dear SIESTA users:
I am a complete starter on parallel computing.And I have a basic
question about installation and the first run:
SIESTA needs to install external libraries before parallel compiling,
however, I don't know what's the proper sequence to install those
Hi ,
I think you should compile mpich, scalapack/blacs and blacs/lapack from
scratch
to solve this problem, which is an incompatibility of compilation
between the three
just think to use the same compiler for every one.
You can follow the howto send with this email, just change the options
Hi Dr Shin ,
I send you join to this mail a Mini-HowTo I wrote
in order to run Siesta v2.0 using mpich on an intel P4 blade center.
I hope it will help you.
--
Sébastien Le Roux
Doctorant
LPMC UMR 5617
CC003
Université de Montpellier II
Place
Hi, I think your problem not comes from, the
Siesat compilation but from the mathematics libraries
compilation. In fact when you want to used SCALAPACK and
BLACS, you have to be shure that they are fully compatible
with the mpi library you are using. Following this point of view
I think that the
Dear SIESTA users,
I am actually in trouble with SIESTA, Indeed this is possible
I am using SIESTA in Ab-Initio MD simulations, on an IBM blade Center
(15 nodes, 2procs/node, 1Go/node)
My jobs are running successfuly, but only using 1procs/node this is
mainly due to my system (216
Hi,
You should read the pfg90-nolibs.make in the siesta-x.y/Src/Sys
directory
#
# Important (at least for V5.0-1 of the pgf90 compiler...)
# Compile atom.f without optimization.
#
atom.o:
$(FC) -c $(FFLAGS_DEBUG) atom.f
#
I hope this will help you
Best
Sébastien Le Roux
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