Re: [SIESTA-L] has anyone been able to complie with Intel fortran v11

2010-02-26 Por tôpico Руслан Жачук
Yes, I compiled siesta-2.0.2 with Intel Fortaran v11 + MKL for parallel version: source /opt/intel/Compiler/11.1/038/bin/ifortvars.sh intel64 export MPICH_F90=ifort make No problems. Ruslan Zhachuk 2010/2/27 Paulo Cesar Piquini > Dear siesta users, > > I saw in the mailing list that there

[SIESTA-L] has anyone been able to complie with Intel fortran v11

2010-02-26 Por tôpico Paulo Cesar Piquini
Dear siesta users, I saw in the mailing list that there are problems in compiling siesta with Intel fortran version 11.x This is also reported in the Intel forum, where the Intel guys say that they will try to solve the bugs related with the FoX library in the new updates. Has anyone been able to

RE: [SIESTA-L] siesta 3

2010-02-26 Por tôpico Matheus Matos
The same thing happens to me. However, I managed to compile with g95 and its libraries lapack and blas, run a job with larger mesh and a larger system. Matheus Matos > Date: Fri, 26 Feb 2010 10:26:38 -0500 > From: ovoz...@gmail.com > To: SIESTA-L@uam.es > Subject: [SIESTA-L] siesta 3 > > Hi ev

Re: [SIESTA-L] Titanium calculation help

2010-02-26 Por tôpico Marcos Veríssimo Alves
>> 3) What happens to your calculation if you just set your orbital radii >> to zero and use an energy shift of, say, 150 meV - in other words, if >> you let the energy shift decide what the orbital radii will be? Also, >> I don't get why you have a charge of 1.91 in your basis set when in >> metal

Re: [SIESTA-L] parallel

2010-02-26 Por tôpico Hui Tang
Dear Akbar, The module mpi_siesta should be included in the library libmpi_f90.a. In my opinion, the error message simply means your libmpi_f90.a is probably not a good one. I noticed that you are using the libmpi_f90.a library compiled with your local machine. I'm not sure if that's a good id

[SIESTA-L] Error for pseudopotential generation

2010-02-26 Por tôpico maxiao
Hi,all I am trying to generate the Psuedopotential for C. What i get is as follows: XC ==> Output data in directory C.test-C.tm2.inp I am not sure whether this XC is an error or just a warning. Does anyone know this XC? Xiao

Re: [SIESTA-L] Transiesta, T-shaped GNRs

2010-02-26 Por tôpico Jose A. Torres
Dear Mayya D.: I am afraid that, at the moment, the kind of systems that can be computed for quantum electron transport using TranSIESTA are those with two-terminals (not three). We encourage you all, in any case, to give us feedback on what features would be useful for your work. Thanks for thi

[SIESTA-L] siesta 3

2010-02-26 Por tôpico Alexander Vozny
Hi everybody, I see people already use transiesta (i.e. siesta3) so I wonder if you could help. I've compiled siesta3 using the same options as siesta2 but having troubles running it. It works fine (in parallel too) for a small job, i.e. bulk with 2 atoms in unit cell. But for bigger jobs (s

Re: [SIESTA-L] Titanium calculation help

2010-02-26 Por tôpico Alexander Vozny
Today when I am relaxing the atoms I found the size of lattice shrank grammatically. Shrank compared to what? Be ready that when you change the Energy Cutoff the equilibrium lattice constant would change. Meanwhile, the forces on Ti atoms are not balanced at all. Forces in bulk unit cell sh

Re: [SIESTA-L] parallel

2010-02-26 Por tôpico akbar jahangiri
here is the file On Fri, Feb 26, 2010 at 8:00 PM, akbar jahangiri wrote: > Dear Friends > > Thank you very much. > > The problem is not solved completely i was able to compile SIESTA in > parallel mode but while running still the same output with too many liens > which are saying SERIAL MODE are

Re: [SIESTA-L] parallel

2010-02-26 Por tôpico akbar jahangiri
Dear Friends Thank you very much. The problem is not solved completely i was able to compile SIESTA in parallel mode but while running still the same output with too many liens which are saying SERIAL MODE are there (as i checked on the node of clusters which SIESTA was running ) that is true ;me

[SIESTA-L] Transiesta, T-shaped GNRs

2010-02-26 Por tôpico Дудник Майя
Dear friends, I read manual & can`t understand how can I calculated TGNR with one bias on the two ends & other to Third end. Can I take volt-ampere-characteristics of this T-structure? Can I do this with Transiesta? Thank you in advance, Mayya D. (Russia)

[SIESTA-L] Transiesta, T-shaped GNRs

2010-02-26 Por tôpico Дудник Майя
Dear friends, I read manual & can`t understand how can I calculated TGNR with one bias on the two ends & other to Third end. Can I take volt-ampere-characteristics of this T-structure? Can I do this with Transiesta? Thank you in advance, Mayya D. (Russia)