Yes. If you click on protein in pep.xml viewer you should see your
highlighted seq. (reading from N to C)
On Mar 5, 3:00 pm, Olesya wrote:
> Good afternoon everyone,
> I have a bit of a rookie question: Does Peptide Prophet (pep.shtml
> files) list peptide sequences from N-terminus to C-terminus
Good afternoon everyone,
I have a bit of a rookie question: Does Peptide Prophet (pep.shtml
files) list peptide sequences from N-terminus to C-terminus (meaning
the sequence starts with N-terminus)?
Thank you in advance.
Olesya
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Doubtful but not sure. PD doesnt detail how it calcs. its prob.
On Mar 5, 1:14 am, Ping wrote:
> Thanks for the response.
>
> I find the function to export prot.xml, but the probability there is
> not peptide
> prophet, right?
>
> We need peptide prophet from the sequest search, and thus we can
