Hi,
May I know what the option "Compress peak lists for smaller output
file" for the Waters.raw input file format is for? What does it do to
the peak list? Will it remove any spectral data and affect my results
in the end? I notice that when that option is selcted, the
generated .mzXML file is hal
Hi Jimmy,
I am able to solve the problem from the email you replied a few days
ago (where I mentioned the ratio states "unavailable"). Turns out, the
problem was with the unspecified mass difference in XPress! It's
producing lovely ratios now!
Many thanks!!!
-Eiko
On Jan 26, 12:27 am, Jimmy En
Hi guys,
I want to implement a database search, but I do not know how to create
a composite database containing forward and decoy sequences with
contaminants and trypsin. I know a software named
"DecoyDatabaseBuilder" that can create a composite database from a IPI
database, but that how to include
Hi, Yoona,
Make sure your browser works well, and check what is your default
browser, IE or Firefox or Chrome.
As for creating a decoy database, I suggest you have a look at the
software named decoydatabasebuilder, which was reported in the article
"An easy-to-use Decoy Database Builder software to
Yes, I did.
On Thu, Jan 27, 2011 at 7:53 PM, Luis Mendoza
wrote:
> Hi Yoona,
> Did you restart your computer?
> --Luis
>
>
> On Thu, Jan 27, 2011 at 7:06 PM, Yoona wrote:
>
>> I just followed 'Windows Installation Guide'. I installed ActivePerl
>> 5.8 and then the latest TPP.
>> It created a flo
Hi Yoona,
Did you restart your computer?
--Luis
On Thu, Jan 27, 2011 at 7:06 PM, Yoona wrote:
> I just followed 'Windows Installation Guide'. I installed ActivePerl
> 5.8 and then the latest TPP.
> It created a flower shaped icon(Trans-Proteomic Pipeline) on my
> desktop folder.
> But it didn't
I just followed 'Windows Installation Guide'. I installed ActivePerl
5.8 and then the latest TPP.
It created a flower shaped icon(Trans-Proteomic Pipeline) on my
desktop folder.
But it didn't show any page if I clicked it. The url is
http://localhost/tpp-bin/tpp_gui.pl
I would like to know how to f
Sorry to interupt the flow of ideas, but for the newcomer to these
file conversion issues: Is there a tool that I could use to validate
a conversion from a .wiff file to mzXML?
thanks
Paul
On Jan 26, 7:43 pm, Nathan Edwards wrote:
> Whoa. I am looking at the results of three different .wiff fi
Dear all,
I still didn't get an answer. Am I asking something obvious, or
already discussed in this group?
In that case, can someone address me to another thread, as I couldn't
find a similar discussion.
Thanks again,
Salvo
On Jan 14, 4:57 pm, Skdona wrote:
> Dear all,
> when we run PeptideProp
