Hello,
First: I'm using TPP 4.4 rev 1 on Mac OS 10.6.8
Let me describe the situation:
- I merge my tandem.pep.xml files in the xinteract GUI.
- I select decoy option with decoy tag.
- I select the run iProphet box and just below I select the run
ProteinProphet on these results box.
- run.
The
Looks like you are missing libgd-devel and libgd.
Install with some command like: yum install gd gd-devel
On Wed, Jul 27, 2011 at 7:14 AM, tiantian wenbos...@gmail.com wrote:
Hi all:
When I install linux(centos) , I got errors like below:
Quantitation/XPress/XPressPeptideUpdateParser/
I read the msconvert threads and the warnings about ReAdW. But our
mass spec facility is using an old version of XCalibur (2.0.7), and I
could not get msconvert to work, either on its own or through the TPP
interface. I assumed it was an issue with the older Xcalibur format.
ReAdW worked fine.
I highly recommend a newer version of pwiz!
-Matt
On 7/27/2011 4:30 PM, DD wrote:
We have 2.0.7 file formats and the cmd line for msconvert works for
mzXML and mzML. It fails on .mgf conversion. We also run MzCv which
is a GUI for msconvert and it only works for mzML. The GUI still
points
Done grabbed latest off site and mgf works.
On Jul 27, 5:57 pm, Matthew Chambers matt.chamber...@gmail.com
wrote:
I highly recommend a newer version of pwiz!
-Matt
On 7/27/2011 4:30 PM, DD wrote:
We have 2.0.7 file formats and the cmd line for msconvert works for
mzXML and mzML.
