There was a space, I fixed that and it started compiling.
However it got to the same point and stopped with the following output:
# Copy all source executables and configuration files to their location
cp -f
/usr/local/src/TPP-4.6.2/src/../build/Ubuntu-x86_64/ASAPRatioPeptideParser
It looks to me like the problem is arising in from this piece of code in
the Makefile:
install-linux-xml:
# Create Directories
mkdir -p ${TPP_ROOT}
mkdir -p ${BIN_DIR}
mkdir -p ${CGI_DIR}
mkdir -p ${SCHEMA_DIR}
mkdir -p ${HTML_DIR}js
This was the last bit of successsfully executed code
# Copy
Liam,
Try looking in the OBJ_ARCH directory and making sure things are built.
Besides that I can't be much more help at the moment as I'm heading out of
town. Hopefully someone else will have some good suggestions.
-Joe
On Thu, Apr 18, 2013 at 12:16 AM, Liam Bell bell.l...@gmail.com wrote:
Where would the OBJ_ARCH directory be or how can I find it?
On 18 April 2013 16:34, Joseph Slagel joseph.sla...@systemsbiology.orgwrote:
Liam,
Try looking in the OBJ_ARCH directory and making sure things are built.
Besides that I can't be much more help at the moment as I'm heading out of
Its typically one directory up, and then under the directory build, so
../build/. You can also add a simple test to the end of the Makefile to
see what its value is:
showarch:
echo $(OBJ_ARCH)
then run make showarch. Oh and its a tab character not spaces in front
of the word echo.
Is sudo make make install possibly equivalent to sudo make followed
by make install? If so, that explains the permissions issue with make
install. It's easy to test. Just do any of the following and see if the
copy permissions issue goes away
sudo make; sudo make install
or
sudo make
I went another route,
sudo -i
and then;
make make install
Ran without any issues...
IT's setup and I've followed the instructions from
herehttp://tools.proteomecenter.org/wiki/index.php?title=TPP_4.5.2:_Installing_on_Ubuntu_10.04.3
for
setting up apache but now that does not seem to be
Just note that you link to setup instructions for TPP 4.5.2 but I'm
assuming you're installing the latest 4.6.2. version. If so, look at the
end of the README file for the mod_rewrite settings that you'll need to add
to your apache config (and anything else that might've changed).
On Thu, Apr
Yip, I was aware of the newer version being installed and adjusted
directory names, file names and paths accordingly...
On 18 April 2013 22:41, Jimmy Eng jke...@gmail.com wrote:
Just note that you link to setup instructions for TPP 4.5.2 but I'm
assuming you're installing the latest 4.6.2.
Hi guys,
I am having a similar issue. Having followed the wiki instruction page and
with the help of this forum successfully installing TPP on Linux 12.10
64bit. I completed the setting up apache instruction with no errors but I
get a The requested URL /tpp/cgi-bin/tpp_gui.pl was not found on
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