RE: [spctools-discuss] why I got this error information?

2013-05-03 Thread Eileen Yue
Jimmy, You are right. I do have "+" in my file name. I need rename the raw file name and redo the Sequest search first, then I will load on TPP to switch to MZML and pep. Xml file. Thank you so much for your kind help Eileen From: spctools-discuss@googlegroups.com [mailto:spctools-discuss@go

Re: [spctools-discuss] why I got this error information?

2013-05-03 Thread Jimmy Eng
Eileen, Any chance you have a "+" in your file name? If yes, that is your problem. And based on your error message you pasted, this looks like the case. If you re-named your pep.xml and mzML files, you will also have to change all references *inside* the pep.xml file to the updated name which I

RE: [spctools-discuss] why I got this error information?

2013-05-03 Thread Eileen Yue
Hi Jimmy, thank you for your advice. I followed your advice and test the files one by one and figured out one raw file name is different from the sequest search file name (my colleague renamed the sequest search result file name). After I renamed the raw file name to match the sequest results na