Hi,
You also can use PeptideShaker/ SearchGui, which come bundled with
OMSSA/ X!Tandem. For processing OMSSA with subsequent
PeptideProphet/ProteinProphet, you can find a script here: DOI:
10.1371/journal.pone.0031438
You should know that OMSSA obviously is not supported anymore, so you
might consider to use X!Tandem instead.
Best regards, Robert
On 12/05/2013 10:59 PM, srihari sharma wrote:
Hello,
I am a very new student of OMSSA database search. I have my .mgf files
with me. I am intending to do an OMSSA search. Could anyone please
give me a lead through the steps.
Thanks a lot,
Srihari Sharma
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