I just shared a box folder with you which contains mzML, fasta and the
pepxml file.
https://cedars.app.box.com/folder/50657299852
Regards
Vidya
On Mon, Jun 25, 2018 at 9:41 AM, David Shteynberg <
david.shteynb...@systemsbiology.org> wrote:
> Hello Vidya,
>
> Currently, there is no support for M
Hello Alastair,
The TPP gui interface (which is a simple windows install) provides the
command lines for the tools it runs and can be used to train yourself on
commandline TPP. Also, running the PeptideProphetParser (PeptideProphet)
and InterProphetParser (iProphet) on the commandline without add
Hello Vidya,
Currently, there is no support for Morpheus in the TPP. If you are able to
place you search results in a shared drive and send me a link for testing,
I should be able to add the Morpheus support back in.
Thanks,
-Davod
On Sat, Jun 23, 2018 at 3:25 PM, Vidya Venkatraman
wrote:
> H
Hi Emma,
I think you are a version behind. Can you please try the latest version to
see if it fixes the issue you've observed?
Thank you,
-David
On Sat, Jun 23, 2018, 3:38 PM Emma Whittington wrote:
> Hi David,
>
> I am using TPP 5.0.0. The modifications I'm specifying are M,15.994915
> STY,7
I'm interested in running the TPP from the linux command line for a few
reasons (flexibility + using the computing power of our linux server, the
administers of which aren't keen on an apache webserver).
I can get some of the individual programs and scripts to run, but I'm
struggling with some
