Hi Zsuzsi,
Could you try renaming your enzyme, "trypsin_gluc" ? I think that is the
secret enzyme name that PeptideProphet recognizes for that enzyme
combination. Sorry for the trouble, I'll have dig through the code to see
who is at fault (Kojak or PeptideProphet) for not properly interpreting th
Hi,
I tried to analyze my DSS and DMTMM cross-linking data using Kojak and
PeptideProphet.
Kojak run properly, however Peptideprophet claims for Trypsin GluC
digestion, which is not defined. Kojak could handle it.
Why does PeptideProphet need the enzyme info at all?
Is this possible to define f
