I'm trying to reproduce the calculation of the num_unique_peptides.
If I use (peptide.weight > 0.5 and peptide.nsp_adjusted_prob >= 0.2), I
seem to get most of them, but I still miss a few.
Anyone have an idea to how it's calculated?
Bosco.
Proteomics Facility, Monash.
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inary (or
> the C source file) and what other information in the pep.xml file you want
> exported.
>
>
> On Wed, Jul 24, 2013 at 5:50 PM, Bosco Ho
> > wrote:
>
>> Does anyone know if there is a way to get x!tandem to write out the
>> matched ions to file from the
Does anyone know if there is a way to get x!tandem to write out the matched
ions to file from the command line?
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If anyone is interested, I figured it out:
http://boscoh.com/protein/installing-the-tpp-462-on-mountain-lion-mac-osx
Bosco. Monash Proteomics Facility.Bosco
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