Re: [spctools-discuss] MSFragger param

2023-02-21 Thread Priti Panchal
r.params msfragger.params > > > > > > > > *From:* spctools-discuss@googlegroups.com < > spctools-discuss@googlegroups.com> *On Behalf Of *Priti Panchal > *Sent:* Tuesday, February 21, 2023 8:32 PM > *To:* spctools-discuss@googlegroups.com > *Subject:* [spctools-d

[spctools-discuss] MSFragger param

2023-02-21 Thread Priti Panchal
Hello all I need to run my file through the MSFragger pipeline in TPP. Can anyone share an MSFragger param file with me? Thanks and Regards Priti PhD Scholar Animal Biotechnology Centre, NDRI Karnal -- You received this message because you are subscribed to the Google Groups "spctools-discuss" g

[spctools-discuss] Tandem Analysis

2022-08-03 Thread Priti Panchal
Hello I am trying to do tandem analysis. I am uncertain whether we can perform a tandem analysis for the lc-ms/ms data of non enzymatically digested sample since in the tandem parameter file there is not any option available for "no cleavage" or "no cut" as found in comet parameters. In tandem,