ric
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> *From:* spctools...@googlegroups.com <
> spctools...@googlegroups.com > *On Behalf Of *Srinivas
> Srikanth
> *Sent:* Monday, June 8, 2020 9:43 PM
> *To:* spctools-discuss >
> *Subject:* [spctools-discuss] Spectral library generation
>
>
Hi Phil,
I have a 15 hek files searched with Mascot, X!Tandem and MSGF+ separately.
I am trying to create a library using TPP pipeline and SpectraST.
I have convert the results individually to pepxml using Mascot2XML,
Tandem2XML and Idconvert and then apply peptideprophet on each file. My
quest
>
> *From:* spctools...@googlegroups.com <
> spctools...@googlegroups.com > *On Behalf Of *Srinivas
> Srikanth
> *Sent:* Tuesday, March 3, 2020 4:40 PM
> *To:* spctools-discuss >
> *Subject:* [spctools-discuss] irt issue
>
>
>
> Hi,
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> I h
Hi,
I have a pepxml from iprophet combining results from Mascot/X!Tandem and
MSGF+. When I am trying to create a spectral library using Spectrast with
the following command:
spectrast -cNspeclib -cICID-QTOF -cP0.814339 -c_IRTirt.txt
-Lspectrastlog_hek.log mascot_xtandem_msgfp_combine.pep.xml
