Both worked! Thanks so much!
On Thursday, October 1, 2020 at 10:55:24 AM UTC-5 jwi...@gmail.com wrote:
> It might also be worth trying the --ignoreUnknownInstrumentError flag in
> your mzML command.
> We had a similar problem with a new Thermo instrument where it wasn't
> supported yet, and
It might also be worth trying the --ignoreUnknownInstrumentError flag in
your mzML command.
We had a similar problem with a new Thermo instrument where it wasn't
supported yet, and this flag just skips the check on the instrument ID.
On Wednesday, September 30, 2020 at 3:15:29 PM UTC-4 David
Hi Laura,
Can you try downloading the latest version of msconvert and replacing your
copy in C:/TPP/bin or where you currently have it installed? Once you get
an mzML file you can copy it to your TPP data directory and run the search,
validation, etc. Let us know how it goes.
Cheers,
-David
I'm using TPP for the first time, so I apologize if this has been resolved
elsewhere. I'm trying to convert some files from a Thermo Eclipse to mzML
and I get an unknown instrument error and the conversion fails. Is there a
way to bypass this?
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