Hi Jimmy,
I am able to solve the problem from the email you replied a few days
ago (where I mentioned the ratio states unavailable). Turns out, the
problem was with the unspecified mass difference in XPress! It's
producing lovely ratios now!
Many thanks!!!
-Eiko
On Jan 26, 12:27 am, Jimmy Eng
Hi,
I managed to solve my problem and its running successfully! I am still
having slight problems with the XPress ratio, though. I'm still
reading about the error that's been previously posted by others.
Hopefully the solution is out there!
Thanks for the help!
-Eiko
On Jan 24, 7:30 pm,
XPRESS had a bug in TPP 4.4.0 which was addressed in TPP 4.4.1. What
solution to what problem are you looking for?
On Tue, Jan 25, 2011 at 2:18 AM, furukie efur...@etc.a-star.edu.sg wrote:
Hi,
I managed to solve my problem and its running successfully! I am still
having slight problems with
Hi,
so I tried running with probability filter 0 and included more
files. The PepXMLViewer.cgi error did not pop out this time, however,
the command still failed. When I tried to open the .shtml file, I
get:-
could not delete /tmp/PepXMLViewera04956, error 13 Permission denied
error:
unable to
Hi Brian,
the xinteract errors were always the same;
run_in c:/Inetpub/wwwroot/ISB/data/Test; c:\Inetpub\tpp-bin\xinteract
-Ninteract.pep.xml -p0.05 -l7 -O c:/Inetpub/wwwroot/ISB/data/Test/
PHHUP00416G00336GL03B01Mix.tandem.pep.xml
c:\Inetpub\tpp-bin\xinteract (TPP v4.4 VUVUZELA rev 1,
You likely have no good hits in this dataset so the program assigns 0
probability. If you apply a probability filter of 0 instead of 0.05
(default) you will see all the spectra and the probability in the
pepXML.
-David
On Thu, Jan 20, 2011 at 11:03 PM, furukie efur...@etc.a-star.edu.sg wrote:
