Jagan,
Hopefully searches run as in steps 1 through 4 have no issues with
visualizing the spectra.
Regarding points 6 and 7, I can't tell you definitely why there's a
difference in scan counts without knowing specifics of how the MGF was
created. If I had to guess, one thing that accounts for
Dear Jimmy,
Thanks for your detailed information. It looks like file conversions from
RAW-mzXML with msconvert and mzXML-mgf with your mzXML2Search.exe
performed as expected.
I have used this mgf file to perform OMSSA search and then pepXML file has
generated with omssa2pepXML from OMSSA
As far as I'm aware, there's no tools that can do this. Hopefully others
can chime in if they know otherwise.
On Mon, Nov 8, 2010 at 7:59 PM, Jagan Kommineni
jagan.kommin...@gmail.comwrote:
I wonder whether these is any way possible to generate mzXML file from MGF
file to match the scan
