Hello everyone, Next week the TPP software tools team will be attending and giving several presentations at ASMS in Houston.
Please feel free to find us and say hello to me (Luis), David, and Michael, and bring your PeptideAtlas/TPP-related software and/or installation questions. We also have information on the recent TPP 6.3 release, as well as on upcoming updates in our posters. We will be conducting an evening *Workshop *on *Tuesday June 6th at 5:45pm in room 351CF*. We'll give a brief intro to the existing TPP tools and then encourage discussion about them and about future directions for the TPP. Topic leads for discussion are: *mining for rare PTMs* in your data, cleavable crosslinker data analysis with *Ving*, and overview of the *Cloud and cluster* enabled TPP. So please come and learn about TPP and be part of the discussion about its future. We also plan to spend extended time at the *Bioinformatics Hub <https://github.com/CompMS/Overview/wiki/ASMS-2023>*, including participating in a session on *open science practices on Tuesday 6 June, 10:30 - 12:30*. The Bioinformatics Hub will be located at the Poster/Exhibit Hall, next to the main entrance; it is open each day during exhibit hall hours. Please check the program and drop by to participate in the various discussions, or to just seek advice, knowledge, and/or support from leading bioinformaticians. Lastly, we will be presenting several *posters*: - *How Well Did You Capture that Ion? Find Out with PeptidePrisoner!* Luis Mendoza *MP 376 * - *Ving: A New Tool in the Trans-Proteomic Pipeline for XL-MS Using Cleavable Cross-Linking Reagents* Michael Hoopmann *TP 174 * - * Modification Specific Modeling in PeptideProphet Improves Validation of Rare PTM Containing Peptides in Complex Samples* David Shteynberg *ThP 610* Other posters related to TPP and our lab: - *Proteomics Standards Initiative (PSI) proposed peak annotation format (mzPAF) and spectral library format (mzSpecLib) standards* Henry Lam *TP 39*0 - *Borrelia PeptideAtlas: A proteome resource for the Lyme disease community* Helisa Wippel *MP 697* - * Achieving robust quantitative analysis of proteomes using Vacuum insulated probe heated electrospray ionization (VIP-HESI) coupled with microflow chromatography and timsTOF-Mass-Spectrometer* Mukul Midha *WP 133* More information at: * http://www.tppms.org/asms/ <http://www.tppms.org/asms/> * Please let your colleagues or any other interested people know, too! Also, please let us know if you have a poster or oral presentation of research that makes use of the TPP; we'll try to drop by and visit. Thanks, --Luis, David, Eric, and Michael -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to spctools-discuss+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/spctools-discuss/CACyS9boxk3ri0Z3C9iJ53LRdQM00uu%3DbOzP9adaX4PVwBiDj-g%40mail.gmail.com.
