Both Stephen Mathewson's Manual for the Home and Farm Production of 
Alcohol Fuel and the Mother Earth Alcohol Fuel manual, both published 
in 1980, look forward with optimism to the development of enzymes and 
microorganisms that will do a better job of converting cellulose to 
sugar for ethanol production. (See Biofuels Library: 
http://journeytoforever.org/biofuel_library.html)

This is what happened to one such microorganism, a bacterium 
engineered to produce alcohol from crop wastes.

Keith Addison
Journey to Forever
Handmade Projects
Tokyo
http://journeytoforever.org/



All life on Earth could be destroyed by genetically modified 
bacteria, a scientist told the New Zealand Royal Commission on 
Genetic Modification earlier this month. Four scientists gave 
evidence for the Green Party at the hearing via video link from the 
United States.

Soil ecologist Elaine Ingham spoke about a plant-killing GM bacteria 
that her Oregon State University research team prevented from being 
released into the environment. Dr Ingham said the alcohol-producing 
bacteria had been approved for field trials when her team discovered 
its lethal effects.

She said her results, replicated many times in double blind studies, 
was dismissed by EPA as "non-scientific."

http://www.safe2use.com/ca-ipm/01-02-05-report.htm

Royal Commission on Genetic Modification

New Zealand

Witness Brief on Testimony

Dr Elaine R. Ingham, Oregon State University

1. Genetically engineered organisms have not been adequately assessed 
for their environmental or human health effects. It is inadequate to 
subject ORGANISMS to the tested required for non-living chemical 
pesticides, and conclude that there will be no adverse or risky 
effects from release of those organisms based on that testing.

2. A graduate student of mine, no longer working in the field of 
engineered organisms, and I did some research on a particular 
engineered bacterium that had been approved by the USEPA for field 
testing. No environmental effects were detected during pesticide or 
toxicity testing with this organism. However, Michael Holmes 
discovered that the engineered bacterium, Klebsiella planticola with 
a additional alcohol gene, killed all the wheat plants in microcosms 
into which the engineered organisms was added 1 . None of the wheat 
plants were killed in microcosms into which the not-engineered parent 
organism or just water were added.

3. This bacterium was engineered to produce alcohol from plant 
debris, so alcohol could be produced after raking up grass straw 
residues instead of burning fields. This organism would have been 
released to the real world by placing the residue left at the bottom 
of the fermentation container following grass straw alcohol 
production on fields as fertilizer. With a single release, we know 
that bacteria can spread over large distances, probably world-wide.

4. These bacteria would therefore get into the root systems of all 
terrestrial plants and begin to produce alcohol. The engineered 
bacterium produces far beyond the required amount of alcohol per gram 
soil than required to kill any terrestrial plant. This would result 
in the death of all terrestrial plants, because the parent bacterium 
has been found in the root systems of all plants where anyone has 
looked for its presence. This could have been the single most 
devastating impact on human beings since we would likely have lost 
corn, wheat, barley, vegetable crops, trees, bushes, etc, conceivably 
all terrestrial plants.

5. It is clear, therefore, that current testing procedures required 
by US regulatory agencies are completely inadequate in assessing the 
potential risks involved with genetically engineered organisms. Until 
such time as adequate testing procedures are instigated and carried 
out, engineered organisms should not be considered to have acceptable 
risks.

1 Holmes, M. and E.R. Ingham. (1999) Ecological effects of 
genetically engineered Klebsiella planticola released into 
agricultural soil with varying clay content. Appl. Soil Ecol. 
3:394-399.


http://www.safe2use.com/ca-ipm/01-02-05-study.htm

Klebsiella planticola--The Gene-Altered Monster That Almost Got Away

The Deadly Genetically Engineered Bacteria that Almost Got Away: A 
Cautionary Tale

Web Note: In the early 1990s a European genetic engineering company 
was preparing to field test and then commercialize on a major scale a 
genetically engineered soil bacteria called Klebsiella planticola. 
The bacteria had been tested--as it turns out in a careless and very 
unscientific mannner--by scientists working for the biotech industry 
and was believed to be safe for the environment. Fortunately a team 
of independent scientists, headed by Dr. Elaine Ingham of Oregon 
State University, decided to run their own tests on the gene-altered 
Klebsiella planticola. What they discovered was not only startling, 
but terrifying-- the biotech industry had created a biological 
monster--a genetically engineered microorganism that would kill all 
terrestrial plants. After Ingham's expose, of course the gene-altered 
Klebsiella planticola was never commercialized. But as Ingham points 
out, the lack of pre-market safety testing of other genetically 
altered organisms virtually guarantees that future biological 
monsters will be released into the environment. Moreover it's not 
only genetic engineering that poses a mortal threat to our soil 
ecology, the soil food web, as Ingham calls it. Chemical-intensive 
agriculture is slowly but surely poisoning our soil and our drinking 
water as well.

This article orginally appeared in the Green Party publication 
Synthesis/Regeneration 18 (Winter 1999)


Ecological Balance and Biological Integrity

Good Intentions and Engineering Organisms that Kill Wheat  by Elaine 
Ingham, Oregon State University <www.soilfoodweb.com>

A genetically engineered Klebsiella-planticola had devastating 
effects on wheat plants while in the same kind of units, same 
incubator, the parent bacteria did not result in the death of the 
wheat plants.

Consider that the parent species of bacteria grows in the root 
systems of every plant that has been assessed for Klebsiella's 
presence. The bacterium also grows on and decomposes plant litter 
material. It is a very common soil organism. It is a fairly 
aggressive soil organism that lives on exudates produced by the roots 
of every plant that grows in soil. This bacterium was chosen for 
those very reasons to be engineered: aggressive growth on plant 
residues.

Field burning of plant residues to prevent disease is a serious cause 
of air pollution throughout the US. In Oregon, people have been 
killed because the cloud from burning fields drifted across the 
highways and caused massive multi-car crashes. A different way was 
needed to get rid of crop residues. If we had an organism that could 
decompose the plant material and produce alcohol from it; then we'd 
have a win-win situation. A sellable product and get rid of plant 
residues without burning. We could add it to gasoline. We could cook 
with it. We could drink grass wine-although whether that would taste 
very good is anyone's guess. Regardless, there are many uses for 
alcohol.

So, genes were taken out of another bacterium, and put into 
Klebsiella-planticola in the right place to result in alcohol 
production. Once that was done, the plan was to rake the plant 
residue from the fields, gather it into containers, and allow it to 
be decomposed by Klebsiella-planticola. But, Klebsiella would produce 
alcohol, which it normally does not do. The alcohol production would 
be performed in a bucket in the barn. But what would you do with the 
sludge left at the bottom of the bucket once the plant material was 
decomposed? Think about a wine barrel or beer barrel after the wine 
or beer has been produced? There is a good thick layer of sludge left 
at the bottom. After Klebsiella-planticola has decomposed plant 
material, the sludge left at the bottom would be high in nitrogen and 
phosphorus and sulfur and magnesium and calcium-all of those 
materials that make a perfectly wonderful fertilizer. This material 
could be spread as a fertilizer then, and there wouldn't be a waste 
product in this system at all. A win-win-win situation.

But my colleagues and I asked the question: What is the effect of the 
sludge when put on fields? Would it contain live 
Klebsiella-planticola engineered to produce alcohol? Yes, it would. 
Once the sludge was spread it onto fields in the form of fertilizer, 
would the Klebsiella-planticola get into root systems? Would it have 
an effect on ecological balance; on the biological integrity of the 
ecosystem; or on the agricultural soil that the fertilizer would be 
spread on?

One of the experiments that Michael Holmes did for his Ph.D. work was 
to bring typical agricultural soil into the lab, sieve it so it was 
nice and uniform, and place it in small containers. We tested it to 
make sure it had not lost any of the typical soil organisms, and 
indeed, we found a very typical soil food web present in the soil. We 
divided up the soil into pint-size Mason jars, added a sterile wheat 
seedling in every jar, and made certain that each jar was the same as 
all the jars.

Into a third of the jars we just added water. Into another third of 
the jars, the not-engineered Klebsiella-planticola, the parent 
organism, was added. Into a final third of the jars, the genetically 
engineered microorganism was added.

The wheat plants grew quite well in the Mason jars in the laboratory 
incubator, until about a week after we started the experiment. We 
came into the laboratory one morning, opened up the incubator and 
went, "Oh my God, some of the plants are dead. What's gone wrong? 
What did we do wrong?" We started removing the Mason jars from the 
incubator. When we were done splitting up the Mason jars, we found 
that every one of the genetically engineered plants in the Mason jars 
was dead. Wheat with the parent bacterium, the normal bacterium, was 
alive and growing well. Wheat plants in the water-only treatment were 
alive and growing well.

 From that experiment, we might suspect that there's a problem with 
this genetically engineered microorganism. The logical extrapolation 
from this experiment is to suggest that it is possible to make a 
genetically engineered microorganism that would kill all terrestrial 
plants. Since Klebsiella-planticola is in the root system of all 
terrestrial plants, presumably all terrestrial plants would be at 
risk.

So what does Klebsiella-planticola do in root systems? The parent 
bacterium makes a slime layer that helps it stick to the plant's 
roots. The engineered bacterium makes about 17 parts per million 
alcohol. What is the level of alcohol that is toxic to roots? About 
one part per million. The engineered bacterium makes the plants 
drunk, and kills them.

But I am not trying to say that all genetically engineered organisms 
are technological terrors. What I am saying is that we have to test 
each and every genetically engineered organism and make sure that it 
really does not have unexpected, unpredicted effects.

They have to be tested in something that approximates a real world 
situation. I've worked with folks in the Environmental Protection 
Agency (EPA) and I know the tests the EPA performs on organisms. They 
often begin their tests with "sterile soil." But if it's sterile, 
then it's not really soil. Soil implies living organisms present. If 
you use "sterile soil" and add a genetically engineered organism to 
that sterile material, are you likely to see the effects of that 
organism on the way nutrients are cycled, or on the other organisms 
in that system? No, you're not likely to. So it's probably no 
surprise that no ecological effects are found when they test 
genetically engineered organisms in sterile soil. They really need to 
put together testing systems, which assess the effects of the test 
organism on all of the organisms present in soil.

What do we mean, organism-wise, when we talk about soil? Agricultural 
soil should have 600 million bacteria in a teaspoon. There should be 
approximately three miles of fungal hyphae in a teaspoon of soil. 
There should be 10,000 protozoa and 20 to 30 beneficial nematodes in 
a teaspoon of soil. No root-feeding nematodes. If there are root 
feeding nematodes, that's an indicator of a sick soil.

There should be roughly 200,000 microarthropods in a square meter of 
soil to a 10-inch depth. All these organisms should be there in a 
healthy soil. If those conditions are present in an agricultural 
soil, there will be adequate disease suppression so that it is not 
necessary to apply fungicides, bactericides, or nematicides. There 
should be 40 to 80% of the root system of the plants colonized by 
mycorrhizal fungi, which will protect those roots against disease.

What happens when you apply the most fungicides and pesticides to 
soil? In every single case where we have looked at foodweb effects of 
pesticides, there are non-target organism effects, and usually very 
detrimental effects. The sets of beneficial organisms that suppress 
disease are reduced. Organisms that cycle nitrogen from 
plant-not-available forms into plant-available forms are killed. 
Organisms that retain nitrogen, phosphorus, sulfur, magnesium, 
calcium, etc. are killed. Organisms that retain nutrients in the soil 
are killed. Once retention is destroyed, where do those nutrients go? 
They end up in our drinking water; or end up in our ground water. You 
and I as taxpayers have to pay in order to clean up that water so we 
can drink it.

Wouldn't it be much wiser to keep those organisms present in the soil 
so those nutrients would be retained and become available to the next 
crop of plants instead of ending up in our drinking water where we 
have to pay in order to have clean drinking water? How do you do 
that? You get the organisms back into the soil. If you grow the 
proper number and types of bacteria, fungi, protozoa, nematodes and 
microarthropods, mycorrhizal fungi in the root systems of the plants, 
you can do away with pesticides. It's been done. We can reduce 
significantly the amount of fertilizer that goes into that soil. In 
experiments that have been done all over the country, all over the 
world, inorganic fertilizer inputs have been reduced, or are not 
added at all, without reduction in plant growth. Where green manure 
or legumes are not available, approximately 40 pounds of nitrogen 
fertilizer, once every four years, are still necessary.

Let's talk about why today's conventional agricultural systems 
require such massive inputs of pesticides and fertilizers. When a 
healthy soil is first plowed out of native grassland, for example, 
the disease-suppressive bacteria and fungi, protozoa and nematodes 
are present. For the first 5 to 15 years after plowing native 
grassland you don't have to use any pesticides. No fertilizers are 
required because there is natural nutrient cycling, natural nitrogen 
retention, and disease suppression. As you plow that soil, you start 
to kill the beneficial organisms, you lose the organic matter, and 
you lose the food to feed the beneficial organisms. After about 10 to 
15 years, if you're not adding back adequate plant residue to feed 
those organisms, you lose them, and start having significant disease 
problems. Then you either leave that land and farm elsewhere, or in 
the US, we used fertilizers to keep yields high. As more and more of 
the organisms were killed by the salt effect of the fertilizers, and 
the constant plowing mined out more and more of the organic matter, 
starving the beneficial organisms to death, disease became a serious 
problem. And we started using more and more pesticide to knock the 
disease back.

In California, around 1955, those disease problems became so severe 
that they thought they would lose agricultural production. So the 
University of California came up with a better way to kill those 
disease-causing organisms. It's called methyl bromide. This chemical 
kills disease-causing organisms-but it also kills everything else. 
There is very little natural disease suppression going on in 
agricultural soils in California.

How many organisms are left in strawberry fields that have been 
methyl-bromided 2 to 3 times a year for the last 14 years? There are 
no microarthropods left. There are no beneficial nematodes left; only 
root feeding nematodes. And there is nobody to control root-feeding 
nematodes in those soils. How many protozoa are left in that soil? 
None. You cannot cycle nutrients. There is nobody home to make 
nitrogen plant-available. So what do you have to do? You have to add 
fertilizer. We force ourselves to have to add fertilizer. We have no 
other choice if you're going to grow those plants in those soils.

How many fungi do you have left in that soil? No beneficial 
fungi-they're all disease-causing. How many bacteria are left? All 
are gone, except for 100 per gram of soil. We should have 600 million 
per teaspoon in that soil; we have 100 left. There is nothing left to 
retain nitrogen in those soils, nothing. So you apply fertilizer. 
What happens to the fertilizer? Whatever fertilizer contacts the 
roots of the plants is indeed taken up; the rest of it flushes 
through the soil into the ground water, into the river. Take Santa 
Maria River in California as an example. This land has had methyl 
bromide applied 2 to 3 times a year for the last 14 years or more. 
Fertilizer is applied as sidedress when strawberries are planted. 
About two weeks later, the river goes up to around 150 parts per 
million nitrates. What is the toxic level for nitrate for humans? Ten 
parts per million nitrates is what the EPA tells us. It used to be 
three parts million but that evel was increased. Can you drink that 
water in the river in the Santa Maria valley? Not unless you'd want 
to die. You would destroy your kidneys pretty fast if you drank that 
water. It is high in nitrate. It is so toxic that you can't even put 
that water back on the plants. The high nitrate burns the plants.

We have a simple solution for this problem. Get the right kind of 
organisms, the right numbers of organisms, back in the soil and let 
them start performing their functions again. Put food for the 
organisms back into the soil; put the organisms back into the soil. 
It's that simple. Send us your soil samples and we can tell you 
whether you have that food web in your soil.

How are you going to fix that set of organisms it if you don't have a 
healthy foodweb? We can help you with that question. We can indeed 
move towards that time when we really don't need pesticides anymore; 
where you only apply fertilizer once every four years and in very 
small amounts. We can move to a sustainable agriculture. It takes 
time and effort, but it is possible.

This article is adapted from the presentation the author gave on July 
18, 1998 at the First Grassroots Gathering on Biodevastation: Genetic 
Engineering.
See also: Holmes, M.T., Ingham, E.R., Doyle, J.D., & Hendricks, C.W. 
(1998). Effects of Klebsiella-planticola SDF20 on soil biota and 
wheat growth in sandy soil. Applied Soil Ecology, 326, 1-12.


Copy posted at:  http://www.purefood.org/ge/klebsiella.cfm

Review of article by Union of Concerned Scientists

"Effects of Klebsiella planticola on soil biota and wheat growth in 
sandy soil."
 M.T. Holmes et al.,
Applied Soil Ecology 326:1-12, 1998

 A recent report in Applied Soil Ecology illustrates the unexpected 
ways in which environmental release of genetically engineered 
microorganisms might cause widespread ecological damage. The core 
experimental finding is that the addition of a genetically engineered 
bacterium, Klebsiella planticola (SDF 20), to a small microcosm 
consisting of wheat plants and sandy soils kills the plants, while 
the addition of the non-engineered parent, Klebsiella planticola (SDF 
15), does not.

Klebsiella (SDF 20) is a lactose-fermenting acterium engineered to 
produce increased ethanol concentrations in fermentors that convert 
agricultural wastes to ethanol. The system (developed in Germany) 
envisioned the disposal of fermentation residues, including the 
engineered bacteria, as an organic soil amendment. The report that 
the engineered bacteria cause plant death raised the possibility that 
soil amendments would kill or impair crops in the fields where they 
were used and, further, that, once released and established, the 
Klebsiella could not be eliminated.

The paper explored but failed to nail down the mechanism of plant 
killing. Whatever the mechanism, the research suggests that 
engineered microorganisms can have far reaching, potentially 
devastating, effects.

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