Public bug reported:
There's something wrong with Python 3.10 on Ubuntu 22.04. I'm pulling my
hair out, but can't figure out what's going wrong. I condensed it to
```
virtualenv venv
venv/bin/python --version
```
This should work, but only gives
```
created virtual environment
Public bug reported:
This is related to https://bugs.launchpad.net/bugs/1825655.
When trying to upgrade to jammy, I got
```
Your python3 install is corrupted. Please fix the '/usr/bin/python3'
symlink.
```
Digging into the matter, it comes down to this symlink checker in
Apparently, this is fixed in jammy.
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https://bugs.launchpad.net/bugs/1940221
Title:
bump to CGAL 5.3
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Public bug reported:
Debian's got it (https://tracker.debian.org/pkg/spdlog), please bump.
** Affects: spdlog (Ubuntu)
Importance: Undecided
Status: New
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Public bug reported:
CGAL 5.3 was released on July 6, 2021. Debian has already bumped
(https://packages.debian.org/sid/libcgal-dev) and it'd be great if
Ubuntu could adopt it, too.
** Affects: cgal (Ubuntu)
Importance: Undecided
Status: New
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Something very similar is reported at
https://bugzilla.redhat.com/show_bug.cgi?id=1797736.
Downgrading fixed the problem there, but I can't see how to downgrade
glib-2.0 on focal
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Public bug reported:
I'm running on Focal. Since recently, Gnome crashes with
```
Mar 6 14:03:16 ishanca gnome-shell[77303]: Failed to set scheduler settings:
Operation not permitted
Mar 6 14:03:16 ishanca kernel: [33974.584854] traps: gnome-shell[81291] trap
int3 ip:7fc2d73a5065
Public bug reported:
I'm trying to upgrade from 19.10 to 20.04 (devel). Unfortunately, the
do-release-upgrade process aborts after "Calculating the changes" without
saying why:
```
sudo do-release-upgrade -d
```
```
Checking for a new Ubuntu release
Get:1 Upgrade tool signature [1,554 B]
> However the idea for Inkscape (at least the "LTS" branch 0.92.x) is to
support both, python2 and python3,
I'm wondering if this might be a mistake. After all, Python 2 will be
unsupported by upstream in a few months time. Not even security bugs
will be fixed, so using it is dangerous from then
Public bug reported:
The fact that Ubuntu only provides and older version of wheels leads to
funny bugs downstream, e.g., [1]. Debian already has 0.32.3 [2]; please
update.
[1] https://github.com/pypa/warehouse/issues/5520
[2] https://packages.debian.org/sid/python3-wheel
** Affects: wheel
@ddstreet Very nice!
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https://bugs.launchpad.net/bugs/1099537
Title:
ubuntu-dev-scripts should be ported to Python 3
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The problem is also present on the ThinkPad X280, worked around by
```
modprobe -r psmouse
modprobe psmouse
```
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https://bugs.launchpad.net/bugs/1722478
Title:
Two-finger scrolling no
Closing, the issue was an outdated local mpi4py installation
** Changed in: dolfin (Ubuntu)
Status: New => Invalid
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Title:
RuntimeError:
Weirdly enough, when doing `import dolfin` a second time, the error is
```
---
AttributeErrorTraceback (most recent call last)
in ()
> 1 import dolfin
Public bug reported:
See https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=908087, please
upgrade to python3-pysimplesoap 1.16-2.1 from Debian.
** Affects: pysimplesoap (Ubuntu)
Importance: Undecided
Status: New
** Tags: cosmic
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Public bug reported:
On Ubuntu 18.10 (cosmic): Simply importing dolfin à la
```
python3 -c "import dolfin"
```
gives
```
ERROR: could not import mpi4py!
Traceback (most recent call last):
File "", line 1, in
File "/usr/lib/python3/dist-packages/dolfin/__init__.py", line 140, in
from
Public bug reported:
Right now, openmpi is broken in cosmic (with 3.1.1.real-1). Effects:
Things like gmsh (which uses openmpi) don't even start.This is due to a
bug known and fixed in Debian [1]. The updated version is available [2],
but hasn't made it into cosmic yet. Any idea of when this will
This is already done for bionic. (The fix is in 3.3.4-4.)
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Title:
Massive eigen compiler warnings with gcc7 ("enum constant in boolean
UMFPACK is now part of suitesparse.
** Changed in: umfpack (Ubuntu)
Status: New => Fix Released
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Title:
UMFPACK 5.6.2 bump
To manage
** Changed in: superlu (Ubuntu)
Status: New => Fix Released
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Title:
[Ffe] SuperLU 5.2
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Public bug reported:
Debian bumped to 0.18.2 [1], would be great if this could land in Ubuntu
as well.
[1] https://tracker.debian.org/pkg/oce
** Affects: oce (Ubuntu)
Importance: Undecided
Status: New
** Tags: upgrade-software-version
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The first error message I'm getting is
```
Sep 12 14:28:41 foobar nm-dispatcher[27267]: /usr/sbin/fanctl: 41:
/usr/sbin/fanctl: arithmetic expression: expecting primary: " (32-)/4 "
```
(Followed by the error messages in the original post.)
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FYI: A backports PPA is available at
https://launchpad.net/~nschloe/+archive/ubuntu/intel-microcode-
backports.
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https://bugs.launchpad.net/bugs/1700373
Title:
Please update microcode
This is the SuperLU_DIST changelog. The accumulated changes for SuperLU
(serial) are more substantial:
* thread-safe: remove static variables; replace xLAMCH by table lookup in
float.h (C99 standard).
* Interface changes to the follwoing routines: xGSSVX (expert driver), xGSTRF
(factorization).
Public bug reported:
Released recently to Debian [1].
[1] https://packages.debian.org/source/sid/superlu
** Affects: superlu (Ubuntu)
Importance: Undecided
Status: New
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This definitely needs to be reopened. Version available through Ubuntu
still is 0.9.1.
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Title:
Please update to python-autopep8-1.1
To manage
Public bug reported:
autopep8 can be used as a module,
```
import autopep8
```
With Python 2, this is working fine, but for Python 3, one currently has to
reside to installing autopep8 via pip, for example;
```
pip3 install autopep8
```
For the sake of completeness, please also provide
Public bug reported:
Trilinos 12.6.3-1 has been released in Debian unstable [1]; please sync
to yakkety.
[1] https://packages.debian.org/source/unstable/trilinos
** Affects: trilinos (Ubuntu)
Importance: Undecided
Status: New
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Public bug reported:
CGAL 4.8. has been released on April 8, 2016, cf. [1]. There already is
a Debian build for it [2]. Please also bump in Ubuntu.
[1] https://github.com/CGAL/cgal/releases
[2] https://packages.debian.org/sid/libcgal-dev
** Affects: cgal (Ubuntu)
Importance: Undecided
Public bug reported:
For some reason, after appearing in all releases of Ubuntu for several
years now, FEniCS has not made it to Xenial. Is this an oversight or is
there a particular reason for it?
** Affects: fenics (Ubuntu)
Importance: Undecided
Status: New
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That's right. Some parts of Trilinos are fairly close to the hardware,
making it impossible to compile Trilinos on anything else than 64bit,
for example. Why ARM64 fails, I'm not exactly sure, but it certainly
doesn't surprise me.
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Public bug reported:
https://packages.debian.org/source/sid/trilinos
** Affects: ubuntu
Importance: Undecided
Status: New
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Title:
OpenMPI 1.10 has been released on Debian; it'd be great to include that
into Ubuntu as well.
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Title:
upgrade to OpenMPI 1.8.*
To manage
I just did
```
$ sudo apt install broadcom-sta-dkms
Reading package lists... Done
Building dependency tree
Reading state information... Done
The following package was automatically installed and is no longer required:
libportaudio0
Use 'apt-get autoremove' to remove it.
The following
Public bug reported:
It's been released in July 2014 (now about a year ago) and there are
released Debian packages for it [1].
[1] https://packages.debian.org/jessie/gource
** Affects: gource (Ubuntu)
Importance: Undecided
Status: New
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@Gerry count me in for a +1.
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Title:
14e4:4331 [MacBookPro8,1] broadcom-sta kernel crashes
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@Gerry Cool! Would you mind putting this in a repository?
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Title:
14e4:4331 [MacBookPro8,1] broadcom-sta kernel crashes
To manage notifications
Forget the report, the dependency is pulled in by libmatio-dev [1].
[1] http://packages.ubuntu.com/vivid/libmatio-dev
** Changed in: hdf5 (Ubuntu)
Status: New = Invalid
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Public bug reported:
From Ubuntu Vivid on, there is a dependency in one of the HDF5 packages on
libhdf5-dev. I've browsed through the individual packages and coudn't find the
exact cause, but I see libhdf5-dev pulled in when installing
libhdf5-openmpi-dev [1]. This is different from the
This is with a MacBook Pro (13-inch, Early 2011, MacBookPro8,1).
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Title:
14e4:4331 broadcom-sta kernel crashes
To manage notifications about
This is probably a python-requests bug; see https://bugs.debian.org
/cgi-bin/bugreport.cgi?bug=766419#23. (It's fixed in Debian.)
** Bug watch added: Debian Bug tracker #766419
http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=766419
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As well, please feel free to file a bug report about this throughput
issue
Indeed, the issues with the b43 driver are separate from the one
described in this bug report. Let's discuss those in a new report.
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Public bug reported:
About once per hour, the `wl` kernel module of `bcmwl-kernel-source` crashes.
`/var/log/syslog` contains
```
Oct 29 15:10:19 fuji kernel: [73721.579735] 0009 880262bdbdd0
8277fcbc
Oct 29 15:10:19 fuji kernel: [73721.579738]
So when the WiFi goes out in Utopic, is there anything in your logs
capturing a crash of some sort?
Yup. I've opened a new bug about one issue at
https://bugs.launchpad.net/ubuntu/+source/bcmwl/+bug/1387199.
(This thread wasn't intended for technical details of individual `wl`
bugs, but rather
+ Did this problem not occur in a release prior to Utopic?
Yes, it did occur in trusty and saucy. It did not occur in raring.
+ Does using the open source b43 driver provide a WORKAROUND
With b43, although without kernel crashes, I'm getting far less
throughput than with
this report is considered closed.
My intention is to open a discussion about providing more than one
binary package for closed-source drivers, but you have made quite clear
that this is not wanted here. I regret this decision.
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@penalvch In the context of this bug report, your comment doesn't make
much sense to me. I assume it was automatically generated.
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Title:
offer
@penalvch I do have the affected hardware. The suggested command opens a
window saying No additional information collected..
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Title:
offer
```
$ lspci -vvnn | grep -A 11 Network
03:00.0 Network controller [0280]: Broadcom Corporation BCM4331 802.11a/b/g/n
[14e4:4331] (rev 02)
Subsystem: Apple Inc. AirPort Extreme [106b:00d6]
Control: I/O- Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop- ParErr-
Stepping- SERR- FastB2B-
Saying it's not working it's slow is not enough information.
The problem here is that we are dealing with with closed-source
software, so I cannot point to a place in the code that should be
implemented differently. I'm also not capable of running production
tests for counting the kernel oopses
@jsalisbury Really? I just downloaded 6.30.223.248 from [1] and still
found `__DATE__` and `__TIME__` used in `src/wl/sys/wl_linux.c`. Haven't
tried installing it, though.
[1] http://www.broadcom.com/support/802.11/linux_sta.php
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Public bug reported:
Scotch 6.0.0 has been released on 2012-12-01. Please bump.
http://gforge.inria.fr/frs/?group_id=248
** Affects: scotch (Ubuntu)
Importance: Undecided
Status: New
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Public bug reported:
OpenMPI 1.8.0 was released a while ago, OpenMPI 1.8.2 is now (Sep. 2014)
the most current version.
Please upgrade the version available for Ubuntu accordingly.
** Affects: openmpi (Ubuntu)
Importance: Undecided
Status: New
** Tags: upgrade-software-version
An upgrade for 4.3.3 is in the works for Debian; we're basically just
waiting for an upstream release at this point.
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Title:
upgrade to 4.3.0
** Description changed:
Comparing the nightly build for netCDF on saucy [1] and trusty [2], I
noticed that the default CMAKE_BUILD_TYPE changed from RelWithDebInfo to
None. I suppose this is in accordance with the discussion on Debian's
debhelper in [3]. As opposed to this, however, it
Minimal Debian package to highlight the misbehavior.
Unpack and execute
```
dpkg-buildpackage -rfakeroot -b
```
in the folder. On trusty, you will see
```
/usr/bin/x86_64-linux-gnu-gcc-o CMakeFiles/hello.dir/hello.c.o -c
/home/nschloe/tmp/test/hello.c
```
On precise, you will see
```
Public bug reported:
When building a package using
```
$ dpkg-buildpackage -rfakeroot -b
```
the build flags as determined by
```
$ dpkg-buildflags
```
are not added to the environment. The bug is present in trusty, and was not
present in precise.
ProblemType: Bug
DistroRelease: Ubuntu 14.04
** Description changed:
Comparing the nightly build for netCDF on saucy [1] and trusty [2], I
noticed that the default CMAKE_BUILD_TYPE changed from RelWithDebInfo to
None. I suppose this is in accordance with the discussion on Debian's
debhelper in [3]. As opposed to this, however, it
Public bug reported:
http://askubuntu.com/questions/477228/cant-click-on-warning-window-
window-not-active
When I want to connect to a network using a certificate, and I don't provide
one, the network manager will open the window No Certificate Authority
certificate chosen, with the buttons
Public bug reported:
The 6.30.* has some regressions that make working with a BCM4331 chipset
hard to impossible. There are blog posts which describe how to roll
back, e.g., https://zoni.nl/posts/2013/11/09/fixing-the-broadcom-
bcm4331-wireless-drivers-on-ubuntu-1310/, and replies suggest that
Public bug reported:
As opposed to open-source software, proprietary software has the USP
that newer versions are not always better. This seems to be the case for
the 6.30.223.141 driver which offers considerably worse performance for
many users than its predecessor 6.20.155.1. This assumption is
See this (resolved) Debian bug report for more details:
http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=709165.
** Bug watch added: Debian Bug tracker #709165
http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=709165
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Public bug reported:
The netCDF version currently available is 4.1.3 and was released in June 2011.
Numerous releases haven't made it into Ubuntu/Debian since then, the latest
being 4.3.1 as of November 2013. Please bump.
** Affects: netcdf (Ubuntu)
Importance: Undecided
Status:
Public bug reported:
UMFPACK 5.6.2 has been released
(http://www.cise.ufl.edu/research/sparse/umfpack/), please bump.
** Affects: umfpack (Ubuntu)
Importance: Undecided
Status: New
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Finding out that this bug affects me cost me a day, upgrading to gcc-4.8
4.8.1-10ubuntu9 in saucy-proposed fixes the issue.
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https://bugs.launchpad.net/bugs/1246802
Title:
STL
Public bug reported:
Most MPI-aware packages provide packages for both MPICH(2) and OpenMPI, e.g.,
https://launchpad.net/ubuntu/+source/hdf5.
This is a feature request for also providing OpenMPI packages for SCALAPACK.
** Affects: scalapack (Ubuntu)
Importance: Undecided
Status:
Public bug reported:
CGAL 4.1 has been released in October 2012, cf.
https://gforge.inria.fr/frs/?group_id=52.
Please bump.
** Affects: cgal (Ubuntu)
Importance: Undecided
Status: New
** Tags: upgrade-software-version
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Public bug reported:
PETSc 3.3 has been release in June 2012, cf.
http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/.
Please bump.
** Affects: petsc (Ubuntu)
Importance: Undecided
Status: New
** Tags: upgrade-software-version
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I did some work for this in https://launchpad.net/~nschloe/+archive
/trilinos-nightly which you may want to check out. It's based off of
netCDF's latest dev version which provides a CMake builds, doing away
with many of the flaws previously present.
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Public bug reported:
I just bumped into a nasty error when submitting a package to the launchpad
build farm that contains a number of MPI test cases (involving mpiexec). All of
the tests failed with funny orte error messages.
I was eventually abel to track it down to
Public bug reported:
A feature request:
ParMETIS has been released with version 4.0.2 in 2011, cf.
http://glaros.dtc.umn.edu/gkhome/metis/parmetis/download. An update of the
Ubuntu/Debian package would be appreciated.
** Affects: parmetis (Ubuntu)
Importance: Undecided
Status:
** Summary changed:
- updade to 4.0.2
+ update to 4.0.2
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Title:
update to 4.0.2
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Public bug reported:
Hi,
Precise is the first Ubuntu version not to feature a Trilinos release
anymore; the previous releases shipped with outdated version (Trilinos
10.4.0). This bug is to address this issue by providing an up-to-date
Trilinos build for Ubuntu 13.04.
I've been working on
Public bug reported:
With a clean installation, I get the following kind of warnings when
doing
FIND_PACKAGE(VTK)
in CMake:
= *snip* =
-- The imported target vtkParseJava references the file
/usr/bin/vtkParseJava
but this file does not exist. Possible
Public bug reported:
The file
/usr/include/slepc/slepcsys.h
includes the nonexistant file slepcconf.h which leads to errors when
compiling against slepc.
** Affects: slepc (Ubuntu)
Importance: Undecided
Status: New
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Public bug reported:
cf. http://sourceforge.net/news/?group_id=176643id=307277
** Affects: libmatio (Ubuntu)
Importance: Undecided
Status: New
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Public bug reported:
So far, netCDF depends on libhdf5-serial-dev, restricting the I/O to serial.
There are a number of parallel HDF5 installation options in Ubuntu already,
e.g., libhdf5-mpi-dev or libhdf5-openmpi-dev. NetCDF could as well build
against those, allowing for parallel I/O. One
This bug also affects anyone trying get disk usage statistics using Cacti.
The script executed by Cacti is
$ perl /usr/share/cacti/site/scripts/query_unix_partitions.pl get
available /dev/sda4
which fails with
/bin/df: `/var/lib/lightdm/.gvfs': Permission denied
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Public bug reported:
Hi,
netCDF 4.1.2 brings a number of substantial bugfixes comparing to the
(currently present) 4.1.1, e.g., ncdump only now being usable for larger
data sets. For details see http://www.unidata.ucar.edu/software/netcdf
/release-notes-4.1.2.html.
Also, NetCDF 4.1.3 has been
*** This bug is a duplicate of bug 882995 ***
https://bugs.launchpad.net/bugs/882995
Public bug reported:
Hi,
after installing paraview-python,
import paraview.simple
in python fails with the error message
ImportError: No module named vtkCommonPytho
I guess some VTK package is missing,
I have the same issue on a Macbook 8,1 with Ubuntu 11.10.
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Title:
Dragging with touchpad on MacBook does not work
To manage notifications about
Okay, I got dragging figured out:
It only requires one finger. Mouse the cursor over the bar above a window,
click (don't release), and without taking your finger off of the touchpad, move
around.
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A workaround is described on http://askubuntu.com/questions/66371/gnome-
terminal-keeps-the-menubar-even-when-the-profile-is-configured-to-hide-
it
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