libsnappy1.0.3-java looks broken in that it does not actually contain a
jar file in Ubuntu.
Looking at this now.
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Title:
Sync picard-tools
Broken by newer maven-debian-helper; fixed up in Ubuntu and submitted
back to Debian
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Title:
Sync picard-tools 1.79-1 (universe) from Debian
** Branch linked: lp:~ubuntu-branches/ubuntu/saucy/snappy1.0.3-java
/saucy-proposed
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Title:
Sync picard-tools 1.79-1 (universe) from Debian
This bug was fixed in the package snappy1.0.3-java - 1.0.3-rc3~dfsg-
3ubuntu1
---
snappy1.0.3-java (1.0.3-rc3~dfsg-3ubuntu1) saucy; urgency=low
* Fixup installation of jar files (LP: #1078012):
- d/snappy1.0.3-java: Use --java-lib to ensure jar file is installed
to
picard-tools synced from Debian OK.
** Changed in: picard-tools (Ubuntu)
Status: Incomplete = Fix Released
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Title:
Sync picard-tools
** Branch linked: lp:debian/snappy1.0.3-java
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Title:
Sync picard-tools 1.79-1 (universe) from Debian unstable (main)
To manage notifications
** Changed in: snappy1.0.3-java (Debian)
Status: New = Fix Released
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Title:
Sync picard-tools 1.79-1 (universe) from Debian unstable
** Also affects: snappy1.0.3-java (Ubuntu)
Importance: Undecided
Status: New
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Title:
Sync picard-tools 1.79-1 (universe) from Debian
I am investigating bug on Debian (see ref), but picard tools has been built on
Debian using libsnappy package.
picard tools build.xml has been patched to use the snappy jar file on Debian
(among other things).
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I just tried to build with pbuilder picard-tools (1.82) and it succeeded
with current libsnappy package in Debian:
...
dh_auto_configure
make[1]: Leaving directory `/tmp/buildd/picard-tools-1.82'
debian/rules override_dh_auto_build
make[1]: Entering directory `/tmp/buildd/picard-tools-1.82'
** Bug watch added: Debian Bug tracker #697158
http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=697158
** Also affects: snappy1.0.3-java (Debian) via
http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=697158
Importance: Unknown
Status: Unknown
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** Changed in: snappy1.0.3-java (Debian)
Status: Unknown = New
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Title:
Sync picard-tools 1.79-1 (universe) from Debian unstable (main)
Hi,
I am maintainer of this package on Debian.
Package build issue looks like a dependency missing issue with:
libsnappy1.0.3-java (from Debian)
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However, the version of libsnappy1.0.3-java in Ubuntu
(http://packages.ubuntu.com/raring/libsnappy1.0.3-java) is the same as
the version of libsnappy1.0.3-java in Debian
(http://packages.debian.org/sid/libsnappy1.0.3-java). Do you have any
idea why this is happening, Oliver?
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** Attachment added: build log of picard-tools 1.79-1 in Raring
https://bugs.launchpad.net/ubuntu/+source/picard-tools/+bug/1078012/+attachment/3439055/+files/last_operation.log
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Unsubbing sponsors for now; re-subscribe us once the build issue is
sorted.
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Title:
Sync picard-tools 1.79-1 (universe) from Debian unstable
the unmodified package fails to build in raring:
compile-sam-jdk:
[mkdir] Created dir: /tmp/buildd/picard-tools-1.79/classes
[javac] /tmp/buildd/picard-tools-1.79/build.xml:101: warning:
'includeantruntime' was not set, defaulting to build.sysclasspath=last; set to
false for repeatable
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