Public bug reported:

ncbi-blast+ remote executions throw ugly 'Critical' warnings on focal
amd64:

$ blastn -query test.fa -db nt -remote
Critical: [blastn] External MBEDTLS version mismatch: 2.16.2 headers vs. 2.16.3 
runtime

[rest of the response trimmed]

where test.fa is any DNA FASTA file, for example:

>test
AAAAAAAAACCCCCCCAAAAAGGGGTTTTT

The execution and output of the aforementioned call seems otherwise
normal despite the 'Critical' message.

From the buildlog on amd64 I see that ncbi-blast+ is built against
libmbedtls12/2.16.2 while it is run with libmbedtls12/2.16.4. I believe
rebuilding with libmbedtls12/2.16.4 would solve the issue.

** Affects: ncbi-blast+ (Ubuntu)
     Importance: Undecided
         Status: New


** Tags: focal

-- 
You received this bug notification because you are a member of Ubuntu
Bugs, which is subscribed to Ubuntu.
https://bugs.launchpad.net/bugs/1966683

Title:
  Rebuild with libmbedtls12/2.16.4 on focal

To manage notifications about this bug go to:
https://bugs.launchpad.net/ubuntu/+source/ncbi-blast+/+bug/1966683/+subscriptions


-- 
ubuntu-bugs mailing list
ubuntu-bugs@lists.ubuntu.com
https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs

Reply via email to