** Branch unlinked: lp:ubuntu/natty/python-scipy
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https://bugs.launchpad.net/bugs/302649
Title:
scipy.weave.inline compilation fails with gcc 4.3
To manage notifications about this
** Branch linked: lp:debian/experimental/python-scipy
** Branch linked: lp:ubuntu/python-scipy
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Title:
scipy.weave.inline compilation fails with
** Changed in: python-scipy (Debian)
Status: Fix Committed = Fix Released
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Title:
scipy.weave.inline compilation fails with gcc 4.3
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This bug was fixed in the package python-scipy - 0.7.0-2ubuntu0.1
---
python-scipy (0.7.0-2ubuntu0.1) lucid-proposed; urgency=low
* Fix scipy.weave.inline compilations (LP: #302649)
-- Sameer Morar smo...@gmail.com Thu, 30 Sep 2010 15:32:13 +0200
** Changed in: python-scipy
** Changed in: python-scipy (Debian)
Status: Unknown = Fix Committed
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scipy.weave.inline compilation fails with gcc 4.3
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Accepted python-scipy into lucid-proposed, the package will build now
and be available in a few hours. Please test and give feedback here. See
https://wiki.ubuntu.com/Testing/EnableProposed for documentation how to
enable and use -proposed. Thank you in advance!
** Tags added: verification-needed
** Branch linked: lp:ubuntu/lucid-proposed/python-scipy
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scipy.weave.inline compilation fails with gcc 4.3
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The new package works for me.
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scipy.weave.inline compilation fails with gcc 4.3
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Addendum to comment 24:
To verify the fix, python-dev needs to be installed. Will open this as a
separate bug, as python-scipy does not recommend or suggest python-dev
to be installed.
** Tags added: verification-done
** Tags removed: verification-needed
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scipy.weave.inline compilation fails
This bug was fixed in the package python-scipy - 0.7.2-2ubuntu1
---
python-scipy (0.7.2-2ubuntu1) maverick; urgency=low
* debian/patches/blitz++.patch:
- Fix scipy.weave.inline compilations (LP: #302649)
-- Sameer Morar smo...@gmail.com Wed, 29 Sep 2010 13:42:10 +0200
**
** Branch linked: lp:ubuntu/python-scipy
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scipy.weave.inline compilation fails with gcc 4.3
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Uploaded to lucid-proposed, pending SRU team verification.
** Changed in: python-scipy (Ubuntu Lucid)
Importance: Undecided = Low
** Changed in: python-scipy (Ubuntu Lucid)
Status: New = Fix Committed
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scipy.weave.inline compilation fails with gcc 4.3
** Changed in: python-scipy (Ubuntu)
Status: Incomplete = Confirmed
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scipy.weave.inline compilation fails with gcc 4.3
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Sameer, Stefano, what is the problem in maverick?
** Changed in: python-scipy (Ubuntu)
Status: Confirmed = Incomplete
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scipy.weave.inline compilation fails with gcc 4.3
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Bugs,
Matthias: Haven't had a proper look at these headers, but the test case
attached to this bug seems to show up some bugs in them.
Full output attached
In file included from
/usr/lib/python2.6/dist-packages/scipy/weave/blitz/blitz/applics.h:394,
from
Err, meant to add, obviously this is now an issue with 4.4
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The fix for this bug is simple. As per the debian patch linked to below, one
needs to add an include for cstdlib above the BZ_NAMESPACE(blitz) call in the
following files:
/usr/share/pyshared/scipy/weave/blitz/blitz/blitz.h
/usr/share/pyshared/scipy/weave/blitz/blitz/mathfunc.h
Patch to fix this bug
** Patch added: Patch to fix this bug
https://bugs.launchpad.net/ubuntu/+source/python-scipy/+bug/302649/+attachment/1652837/+files/python-scipy_0.7.2-2ubuntu1.debdiff
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You
** Changed in: python-scipy (Ubuntu)
Assignee: (unassigned) = Stefano Rivera (stefanor)
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scipy.weave.inline compilation fails with gcc 4.3
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Updated patch - added an cstdlib include to prettyprint.h
Change reference to launchpad bug number.
Updated the Patch Tags to only use a description and bug-ubuntu fields.
** Patch added: Patch v2
Thanks for the patch, I'll forward this to Debian
** Changed in: python-scipy (Ubuntu)
Status: Confirmed = Fix Committed
** Changed in: python-scipy (Ubuntu)
Assignee: Stefano Rivera (stefanor) = Sameer Morar (smorar)
--
scipy.weave.inline compilation fails with gcc 4.3
** Also affects: python-scipy (Ubuntu Lucid)
Importance: Undecided
Status: New
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scipy.weave.inline compilation fails with gcc 4.3
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** Changed in: python-scipy (Ubuntu Lucid)
Assignee: (unassigned) = Sameer Morar (smorar)
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scipy.weave.inline compilation fails with gcc 4.3
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Here is a patch for lucid
** Patch added: Patch for lucid
https://bugs.launchpad.net/ubuntu/+source/python-scipy/+bug/302649/+attachment/1653308/+files/python-scipy_0.7.0-2ubuntu1.debdiff
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scipy.weave.inline compilation fails with gcc 4.3
https://bugs.launchpad.net/bugs/302649
You
Here is a patch for lucid
** Patch added: Patch for lucid
https://bugs.launchpad.net/ubuntu/+source/python-scipy/+bug/302649/+attachment/1653309/+files/python-scipy_0.7.0-2ubuntu1.debdiff
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scipy.weave.inline compilation fails with gcc 4.3
https://bugs.launchpad.net/bugs/302649
You
** Package changed: python-scipy (Debian) = blitz++ (Debian)
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** Bug watch added: Debian Bug tracker #598520
http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=598520
** Also affects: python-scipy (Debian) via
http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=598520
Importance: Unknown
Status: Unknown
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scipy.weave.inline compilation fails
** Tags added: patch
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scipy.weave.inline compilation fails with gcc 4.3
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This bug still exists in ubuntu 10.10:
smo...@spud:~/$ dpkg -l|grep scipy
ii python-scipy 0.7.2-2
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** Changed in: scipy
Status: Fix Released = New
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The weave bug seems to be still present in scipy 0.7.1
I am running Ubuntu 9.10 (Karmic) and have scipy installed from source
(since it is not in the repos) without problems, the required Atlas, ...
libraries were installed using synaptic
ipython:
In [2]: scipy.__version__
Out[2]: '0.7.1'
changing the compiler to g++-4.2 it works... Karmic comes with g++-4.4
though
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Note that according to the scipy bug tracker, this isn't going to be
fixed until scipy 0.7.1, which means that this bug still exists in
ubuntu 9.04.
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scipy.weave.inline compilation fails with gcc 4.3
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** Changed in: python-scipy (Debian)
Status: Unknown = Fix Released
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scipy.weave.inline compilation fails with gcc 4.3
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Fixed upstream with new 0.7.0.
** Changed in: python-scipy (Ubuntu)
Importance: Undecided = Medium
Status: New = Fix Committed
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scipy.weave.inline compilation fails with gcc 4.3
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This bug was fixed in the package python-scipy - 0.7.0-0ubuntu1
---
python-scipy (0.7.0-0ubuntu1) jaunty; urgency=low
* New upstream version (LP: #285936, #299375, #302649).
* Apply changes from Debian's python-modules team, thanks!
* debian/rules: make python-scipy ready for
** Changed in: scipy
Status: Unknown = Fix Released
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scipy.weave.inline compilation fails with gcc 4.3
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** Also affects: scipy via
http://projects.scipy.org/scipy/scipy/ticket/739
Importance: Unknown
Status: Unknown
** Also affects: python-scipy (Debian) via
http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=455661
Importance: Unknown
Status: Unknown
--
scipy.weave.inline
I can confirm the bug and workaround of linking g++-4.2.
For reference, here is the upstream ticket:
http://www.scipy.org/scipy/scipy/ticket/739
What Matthias has noted is present in the debian patch.
And the original (as far as I can tell) mention of this problem on the debian
list, more than
an include of cstdlib seems to be missing.
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Attached is some python code which demonstrates the bug. To reproduce, please
follow the following steps:
1) Ensure that gcc-4.3 is installed:
[EMAIL PROTECTED]:/usr/bin# ls -la g++
lrwxrwxrwx 1 root root 7 2008-11-27 02:37 g++ - g++-4.3
2) Remove pre-compiled python snippets
[EMAIL
** Description changed:
Binary package hint: python-scipy
The compiler fails with the following error:
weave: compiling
In file included from
/usr/lib/python2.5/site-packages/scipy/weave/blitz/blitz/applics.h:400,
from
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