Public bug reported:

Root issue:
 grub ignore protective GPT record if that record is not the first one in MBR.
Need to correct: 
 If protective GPT record appears on any place in MBR - grub must consider 
system as GPT.

I have hybrid GPT/MBR. Hybrid MBR contains protective record 0xEE but that  
record is NOT first.
Here is output of gdisk (hybrid MBR):
Number  Boot  Start Sector   End Sector   Status      Code
   1                468992    101480447   primary     0x07
   2             234375168    234569727   primary     0xEF
   3      *      550782882    574927413   primary     0x83
   4                     1       468991   primary     0xEE

gdisk (GPT):
Number  Start (sector)    End (sector)  Size       Code  Name
   1            2048          206847   100.0 MiB   EF00  EFI system partition
   2          206848          468991   128.0 MiB   0C01  Microsoft reserved part
   3          468992       101480447   48.2 GiB    0700  win7
   4       101480448       138344447   17.6 GiB    AF00  other
   5       390625280       527343615   65.2 GiB    8301  copyfilesWIN7
   6       527343616       550780927   11.2 GiB    AF00  backupfile
   7       581042176       625141759   21.0 GiB    2700  Samsung_diag
   8       138344448       234375167   45.8 GiB    0700  DATA
  11       574927414       581042175   2.9 GiB     8200  
  12       234375168       234569727   95.0 MiB    EF02  grub
  13       550782882       574927413   11.5 GiB    0700  linux

After that it result in such errors:
root@helena:~# grub-install /dev/sda
/usr/sbin/grub-setup: warn: This msdos-style partition label has no post-MBR 
gap; embedding won't be possible!.
/usr/sbin/grub-setup: warn: Embedding is not possible.  GRUB can only be 
installed in this setup by using blocklists.  However, blocklists are 
UNRELIABLE and their use is discouraged..
/usr/sbin/grub-setup: error: will not proceed with blocklists.

invoking grub-mkconfig manually gives:
root@helena:~# grub-mkconfig  -o test.conf
Generating grub.cfg ...
Found linux image: /boot/vmlinuz-3.2.0-24-generic
Found initrd image: /boot/initrd.img-3.2.0-24-generic
Found linux image: /boot/vmlinuz-3.0.0-19-generic
Found initrd image: /boot/initrd.img-3.0.0-19-generic
Found linux image: /boot/vmlinuz-2.6.38-14-generic
Found initrd image: /boot/initrd.img-2.6.38-14-generic
Found linux image: /boot/vmlinuz-2.6.38-8-generic
Found initrd image: /boot/initrd.img-2.6.38-8-generic
Found memtest86+ image: /boot/memtest86+.bin
grub-probe: error: cannot find a GRUB drive for /dev/sda4.  Check your 
device.map.
grub-probe: error: cannot find a GRUB drive for /dev/sda5.  Check your 
device.map.
grub-probe: error: cannot find a GRUB drive for /dev/sda6.  Check your 
device.map.
grub-probe: error: cannot find a GRUB drive for /dev/sda7.  Check your 
device.map.
done

I have tried diferent approach - was  removed hybrid MBR (retained only 
protective record). After that grub-install succeed. After that I have created 
hybrid MBR (the same as above).
But after reboot I have got "grub rescue" prompt and error: no such partition.

root@helena:~# lsb_release -rd
Description:    Ubuntu 12.04 LTS
Release:        12.04

root@helena:~# apt-cache policy grub-pc
grub-pc:
  Installed: 1.99-21ubuntu3
  Candidate: 1.99-21ubuntu3
  Version table:
 *** 1.99-21ubuntu3 0
        500 http://ua.archive.ubuntu.com/ubuntu/ precise/main amd64 Packages
        100 /var/lib/dpkg/status

ProblemType: Bug
DistroRelease: Ubuntu 12.04
Package: grub-pc 1.99-21ubuntu3
ProcVersionSignature: Ubuntu 2.6.38-14.58-generic 2.6.38.8
Uname: Linux 2.6.38-14-generic x86_64
ApportVersion: 2.0.1-0ubuntu7
Architecture: amd64
Date: Fri May 11 17:45:17 2012
InstallationMedia: Ubuntu 11.04 "Natty Narwhal" - Release amd64+mac (20110426)
SourcePackage: grub2
UpgradeStatus: Upgraded to precise on 2012-05-07 (3 days ago)

** Affects: grub2 (Ubuntu)
     Importance: Undecided
         Status: New


** Tags: amd64 apport-bug gpt grub hybrid precise

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https://bugs.launchpad.net/bugs/998097

Title:
  Grub2 not recognise GPT when presence hybrid MBR

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