There was a change in the binary format of Arrow 0.15.1 and there is an
environment variable you can set to make pyarrow 0.15.1 compatible with
current Spark, which looks to be your problem. Please see the doc below for
instructions added in SPARK-2936. Note, this will not be required for the
upcom
, 2019 at 6:08 PM Hyukjin Kwon wrote:
>> >
>> > +1
>> >
>> > 2019년 11월 6일 (수) 오후 11:38, Wenchen Fan 님이 작성:
>> >>
>> >> Sounds reasonable to me. We should make the behavior consistent within
>> Spark.
>> >>
>> >>
Currently, when a PySpark Row is created with keyword arguments, the fields
are sorted alphabetically. This has created a lot of confusion with users
because it is not obvious (although it is stated in the pydocs) that they
will be sorted alphabetically. Then later when applying a schema and the
fi
Hi Artem,
I don't believe this is currently possible, but it could be a great
addition to PySpark since this would offer a convenient and efficient way
to parallelize nested column data. I created the JIRA
https://issues.apache.org/jira/browse/SPARK-29040 for this.
On Tue, Aug 27, 2019 at 7:55 PM
It would be possible to use arrow on regular python udfs and avoid pandas,
and there would probably be some performance improvement. The difficult
part will be to ensure that the data remains consistent in the conversions
between Arrow and Python, e.g. timestamps are a bit tricky. Given that we
al
+1 and the draft sounds good
On Thu, May 30, 2019, 11:32 AM Xiangrui Meng wrote:
> Here is the draft announcement:
>
> ===
> Plan for dropping Python 2 support
>
> As many of you already knew, Python core development team and many
> utilized Python packages like Pandas and NumPy will drop Python
Hi,
BinaryType support was not added until Spark 2.4.0, see
https://issues.apache.org/jira/browse/SPARK-23555. Also, pyarrow 0.10.0 or
greater is require as you saw in the docs.
Bryan
On Thu, May 2, 2019 at 4:26 AM Nicolas Paris
wrote:
> Hi all
>
> I am using pySpark 2.3.0 and pyArrow 0.10.0
>
Hi, could you please clarify if you are running a YARN cluster when you see
this problem? I tried on Spark standalone and could not reproduce. If
it's on a YARN cluster, please file a JIRA and I can try to investigate
further.
Thanks,
Bryan
On Sat, Dec 15, 2018 at 3:42 AM 李斌松 wrote:
> spark2.
Here is a link to the JIRA for adding StructType support for scalar
pandas_udf https://issues.apache.org/jira/browse/SPARK-24579
On Wed, Jul 25, 2018 at 3:36 PM, Hichame El Khalfi
wrote:
> Hey Holden,
> Thanks for your reply,
>
> We currently using a python function that produces a Row(TS=LongT
Hi Patrick,
It looks like it's failing in Scala before it even gets to Python to
execute your udf, which is why it doesn't seem to matter what's in your
udf. Since you are doing a grouped map udf maybe your group sizes are too
big or skewed? Could you try to reduce the size of your groups by addin
Can you share some of the code used, or at least the pandas_udf plus the
stacktrace? Also does decreasing your dataset size fix the oom?
On Mon, May 28, 2018, 4:22 PM Traku traku wrote:
> Hi.
>
> I'm trying to use the new feature but I can't use it with a big dataset
> (about 5 million rows).
>
The example works for me, please check your environment and ensure you are
using Spark 2.3.0 where OneHotEncoderEstimator was introduced.
On Fri, May 18, 2018 at 12:57 AM, Matteo Cossu wrote:
> Hi,
>
> are you sure Dataset has a method withColumns?
>
> On 15 May 2018 at 16:58, Mina Aslani wrote
Yes, the workaround is to create multiple StringIndexers as you described.
OneHotEncoderEstimator is only in Spark 2.3.0, you will have to use just
OneHotEncoder.
On Tue, May 15, 2018, 8:40 AM Mina Aslani wrote:
> Hi,
>
> So, what is the workaround? Should I create multiple indexer(one for each
Hi Xavier,
Regarding Arrow usage in Spark, using Arrow format to transfer data between
Python and Java has been the focus so far because this area stood to
benefit the most. It's possible that the scope of Arrow could broaden in
the future, but there still needs to be discussions about this.
Bry
Hi Ashwin,
This sounds like it might be a good use for Apache Arrow, if you are open
to the type of format to exchange. As of Spark 2.3, Dataset has a method
"toArrowPayload" that will convert a Dataset of Rows to a byte array in
Arrow format, although the API is currently not public. Your clien
Hi Aakash,
First you will want to get the the random forest model stage from the best
pipeline model result, for example if RF is the first stage:
rfModel = model.bestModel.stages[0]
Then you can check the values of the params you tuned like this:
rfModel.getNumTrees
On Mon, Apr 16, 2018 at 7:
Hi Kant,
The udfDeterministic would be set to false if the results from your UDF are
non-deterministic, such as produced by random numbers, so the catalyst
optimizer will not cache and reuse results.
On Mon, Apr 2, 2018 at 12:11 PM, kant kodali wrote:
> Looks like there is spark.udf().registerP
Can you provide some code/data to reproduce the problem?
On Fri, Feb 9, 2018 at 9:42 AM, nhamwey
wrote:
> I am using Spark 2.2.0 through Python.
>
> I am repeatedly getting a zero weight of sums error when trying to run a
> model. This happens even when I do not specify a defined weightCol =
> "
rk-2.2.1-bin-hadoop2.7/
> examples/src/main/python/ml/estimator_transformer_param_example.py
> return empty parameters when printing "lr.extractParamMap()"
>
> That's weird
>
> Thanks
>
> Le 30 janv. 2018 à 23:10, Bryan Cutler écrivait :
> > Hi Michelle,
Hi Michelle,
Your original usage of ParamGridBuilder was not quite right, `addGrid`
expects (some parameter, array of values for that parameter). If you want
to do a grid search with different regularization values, you would do the
following:
val paramMaps = new ParamGridBuilder().addGrid(logis
Spark internally stores timestamps as UTC values, so cearteDataFrame will
covert from local time zone to UTC. I think there was a Jira to correct
parquet output. Are the values you are seeing offset from your local time
zone?
On Jan 11, 2018 4:49 PM, "sk skk" wrote:
> Hello,
>
> I am using creat
Hi Prem,
Spark actually does somewhat support different algorithms in
CrossValidator, but it's not really obvious. You basically need to make a
Pipeline and build a ParamGrid with different algorithms as stages. Here
is an simple example:
val dt = new DecisionTreeClassifier()
.setLabelCol("
Looks like there might be a problem with the way you specified your
parameter values, probably you have an integer value where it should be a
floating-point. Double check that and if there is still a problem please
share the rest of your code so we can see how you defined "gridS".
On Fri, May 5,
Hi Yogesh,
It would be easier to help if you included your code and the exact error
messages that occur. If you are creating a Spark DataFrame with a Pandas
DataFrame, then Spark does not read the schema and infers from the data to
make one. This might be the cause of your issue if the schema is
I'll check it out, thanks for sharing Alexander!
On Dec 13, 2016 4:58 PM, "Ulanov, Alexander"
wrote:
> Dear Spark developers and users,
>
>
> HPE has open sourced the implementation of the belief propagation (BP)
> algorithm for Apache Spark, a popular message passing algorithm for
> performing
Hi Anirudh,
All types of contributions are welcome, from code to documentation. Please
check out the page at
https://cwiki.apache.org/confluence/display/SPARK/Contributing+to+Spark for
some info, specifically keep a watch out for starter JIRAs here
https://issues.apache.org/jira/issues/?jql=proje
It looks like you have logging enabled and your application event log is
too large for the master to build a web UI from it. In spark 1.6.2 and
earlier, when an application completes, the master rebuilds a web UI to
view events after the fact. This functionality was removed in spark 2.0
and the h
"feature" column
> and nor the 5 indexed columns.
> Of-course there is a dirty way of doing this, but I am wondering if there
> some optimized/intelligent approach for this.
>
> Thanks,
> Baahu
>
> On Wed, Aug 31, 2016 at 3:30 AM, Bryan Cutler wrote:
>
>>
tegories(180)
>
> val decisionTree = new DecisionTreeClassifier().
> setMaxBins(300).setMaxDepth(1).setImpurity("entropy").
> setLabelCol("indexed_user_action").setFeaturesCol("indexedfeature").
> setPredictionCol("prediction")
>
> val pipeline =
You will need to cast bestModel to include the MLWritable trait. The class
Model does not mix it in by default. For instance:
cvModel.bestModel.asInstanceOf[MLWritable].save("/my/path")
Alternatively, you could save the CV model directly, which takes care of
this
cvModel.save("/my/path")
On F
The algorithm update is just broken into 2 steps: trainOn - to learn/update
the cluster centers, and predictOn - predicts cluster assignment on data
The StreamingKMeansExample you reference breaks up data into training and
test because you might want to score the predictions. If you don't care
ab
That's the correct fix. I have this done along with a few other Java
examples that still use the old MLlib Vectors in this PR thats waiting for
review https://github.com/apache/spark/pull/14308
On Jul 28, 2016 5:14 AM, "Robert Goodman" wrote:
> I changed import in the sample from
>
> import
Everett, I had the same question today and came across this old thread.
Not sure if there has been any more recent work to support this.
http://apache-spark-developers-list.1001551.n3.nabble.com/Using-UDFs-in-Java-without-registration-td12497.html
On Thu, Jul 21, 2016 at 10:10 AM, Everett Anderso
ML has a DataFrame based API, while MLlib is RDDs and will be deprecated as
of Spark 2.0.
On Thu, Jul 21, 2016 at 10:41 PM, VG wrote:
> Why do we have these 2 packages ... ml and mlib?
> What is the difference in these
>
>
>
> On Fri, Jul 22, 2016 at 11:09 AM, Bryan Cutler
Hi JG,
If you didn't know this, Spark MLlib has 2 APIs, one of which uses
DataFrames. Take a look at this example
https://github.com/apache/spark/blob/master/examples/src/main/java/org/apache/spark/examples/ml/JavaLinearRegressionWithElasticNetExample.java
This example uses a Dataset, which is t
ngland and Wales.
> Registered number: 02675207.
> Registered address: Globe House, Clivemont Road, Maidenhead, Berkshire SL6
> 7DY, UK.
> --
> *From:* Bryan Cutler
> *Sent:* 19 July 2016 02:20:38
> *To:* Rory Waite
> *Cc:* user
> *Subject:* Re: spa
Hi Rory, for starters what version of Spark are you using? I believe that
in a 1.5.? release (I don't know which one off the top of my head) there
was an addition that would also display the config property when a timeout
happened. That might help some if you are able to upgrade.
On Jul 18, 2016
e in file formats.
>
> 3. I tested this same code on another Spark cloud platform and it displays
> the same symptoms when run there.
>
> Thanks.
> Rich
>
>
> On Wed, Jun 29, 2016 at 12:59 AM, Bryan Cutler wrote:
>
>> Are you fitting the VectorIndexer to the entire da
Can you try running the example like this
./bin/run-example sql.RDDRelation
I know there are some jars in the example folders, and running them this
way adds them to the classpath
On Jul 7, 2016 3:47 AM, "kevin" wrote:
> hi,all:
> I build spark use:
>
> ./make-distribution.sh --name "hadoop2.7
Hi Felix,
I think the problem you are describing has been fixed in later versions,
check out this JIRA https://issues.apache.org/jira/browse/SPARK-13803
On Wed, Jun 29, 2016 at 9:27 AM, Mich Talebzadeh
wrote:
> Fine. in standalone mode spark uses its own scheduling as opposed to Yarn
> or anyt
Are you fitting the VectorIndexer to the entire data set and not just
training or test data? If you are able to post your code and some data to
reproduce, that would help in troubleshooting.
On Tue, Jun 28, 2016 at 4:40 PM, Rich Tarro wrote:
> Thanks for the response, but in my case I reversed
The problem might be that you are evaluating with "predictionLabel" instead
of "prediction", where predictionLabel is the prediction index mapped to
the original label strings - at least according to the
RandomForestClassifierExample, not sure if your code is exactly the same.
On Tue, Jun 28, 2016
The stack trace you provided seems to hint that you are calling "predict"
on an RDD with Vectors that are not the same size as the number of features
in your trained model, they should be equal. If that's not the issue, it
would be easier to troubleshoot if you could share your code and possibly
s
ld run in the yarn
> conf? I haven't found any useful information regarding that.
>
> Thanks.
>
> On Mon, Jun 6, 2016 at 4:52 PM, Bryan Cutler wrote:
>
>> In that mode, it will run on the application master, whichever node that
>> is as specified in your yarn conf.
In that mode, it will run on the application master, whichever node that is
as specified in your yarn conf.
On Jun 5, 2016 4:54 PM, "Saiph Kappa" wrote:
> Hi,
>
> In yarn-cluster mode, is there any way to specify on which node I want the
> driver to run?
>
> Thanks.
>
This is currently being worked on, planned for 2.1 I believe
https://issues.apache.org/jira/browse/SPARK-7159
On May 28, 2016 9:31 PM, "Stephen Boesch" wrote:
> Thanks Phuong But the point of my post is how to achieve without using
> the deprecated the mllib pacakge. The mllib package already ha
/scala/org/apache/spark/examples/mllib/RecommendationExample.scala#L62
On Fri, Mar 11, 2016 at 8:18 PM, Shishir Anshuman wrote:
> The model produced after training.
>
> On Fri, Mar 11, 2016 at 10:29 PM, Bryan Cutler wrote:
>
>> Are you trying to save predictions on a dataset to a
Are you trying to save predictions on a dataset to a file, or the model
produced after training with ALS?
On Thu, Mar 10, 2016 at 7:57 PM, Shishir Anshuman wrote:
> hello,
>
> I am new to Apache Spark and would like to get the Recommendation output
> of the ALS algorithm in a file.
> Please sugg
t; x[0]]).cache()#.collect()
>
> corpus = grouped.zipWithIndex().map(lambda (term_counts, doc_id): [doc_id,
> term_counts]).cache()
>
> #corpus.cache()
>
> model = LDA.train(corpus, k=10, maxIterations=10, optimizer="online")
>
> #ldaModel = LDA.train(corpus, k=3)
&
I'm not exactly sure how you would like to setup your LDA model, but I
noticed there was no Python example for LDA in Spark. I created this issue
to add it https://issues.apache.org/jira/browse/SPARK-13500. Keep an eye
on this if it could be of help.
bryan
On Wed, Feb 24, 2016 at 8:34 PM, Mishr
Using flatmap on a string will treat it as a sequence, which is why you are
getting an RDD of char. I think you want to just do a map instead. Like
this
val timestamps = stream.map(event => event.getCreatedAt.toString)
On Feb 25, 2016 8:27 AM, "Dominik Safaric" wrote:
> Recently, I've implemen
2, 4, 6226.40232139]
>>
>> [1, 2, 785.84266]
>>
>> [5, 1, 6706.05424139]
>>
>>
>>
>> and monitor. please let know if I missed something
>>
>> Krishna
>>
>>
>>
>>
>>
>> On Fri
t; But am seeing same centers always for the entire duration - ran the app
> for several hours with a custom receiver.
>
> Yes I am using the latestModel to predict using "labeled" test data. But
> also like to know where my centers are
>
> regards
> Krishna
>
>
>
Could you elaborate where the issue is? You say calling
model.latestModel.clusterCenters.foreach(println) doesn't show an updated
model, but that is just a single statement to print the centers once..
Also, is there any reason you don't predict on the test data like this?
model.predictOnValues(t
he//filecache/116/spark-assembly-1.6.0-hadoop2.4.0.jar:/home//spark-1.6.0-bin-hadoop2.4/python:/home//code/libs:/scratch5/hadoop/yarn/local/usercache//appcache/application_1450370639491_0239/container_1450370639491_0239_01_01/pyspark.zip:/scratch5/hadoop/yarn/local/usercache//appcache/application_14503
>
> *From:* Bryan Cutler [mailto:cutl...@gmail.com]
> *Sent:* Thursday, January 14, 2016 2:19 PM
> *To:* Rachana Srivastava
> *Cc:* user@spark.apache.org; d...@spark.apache.org
> *Subject:* Re: Random Forest FeatureImportance throwing
> NullPointerException
>
>
>
> Hi Rac
Hi Rachana,
I got the same exception. It is because computing the feature importance
depends on impurity stats, which is not calculated with the old
RandomForestModel in MLlib. Feel free to create a JIRA for this if you
think it is necessary, otherwise I believe this problem will be eventually
s
Spark or Yarn is going
> behind my back, so to speak, and using some older version of python I didn't
> even know was installed.
>
> Thanks again for all your help thus far. We are getting close
>
> Andrew
>
>
>
> On Wed, Jan 13, 2016 at 6:13 PM, Bryan Cu
submit --master yarn --deploy-mode client
> --driver-memory 4g --executor-memory 2g --executor-cores 1
> ./examples/src/main/python/pi.py 10*
> I get the error I mentioned in the prior email:
> Error from python worker:
> python: module pyspark.daemon not found
>
> An
Hi Andrew,
I know that older versions of Spark could not run PySpark on YARN in
cluster mode. I'm not sure if that is fixed in 1.6.0 though. Can you try
setting deploy-mode option to "client" when calling spark-submit?
Bryan
On Thu, Jan 7, 2016 at 2:39 PM, weineran <
andrewweiner2...@u.northwe
This is a known issue https://issues.apache.org/jira/browse/SPARK-9844. As
Noorul said, it is probably safe to ignore as the executor process is
already destroyed at this point.
On Mon, Dec 21, 2015 at 8:54 PM, Noorul Islam K M wrote:
> carlilek writes:
>
> > My users use Spark 1.5.1 in standa
ct().toString());
total += rdd.count();
}
}
MyFunc f = new MyFunc();
inputStream.foreachRDD(f);
// f.total will have the count of all RDDs
Hope that helps some!
-bryan
On Wed, Dec 16, 2015 at 8:37 AM, Bryan Cutler wrote:
> Hi Andy,
>
> Regarding the foreachrdd return valu
Hi Andy,
Regarding the foreachrdd return value, this Jira that will be in 1.6 should
take care of that https://issues.apache.org/jira/browse/SPARK-4557 and make
things a little simpler.
On Dec 15, 2015 6:55 PM, "Andy Davidson"
wrote:
> I am writing a JUnit test for some simple streaming code. I
Hi Roberto,
1. How do they differ in terms of performance?
They both use alternating least squares matrix factorization, the main
difference is ml.recommendation.ALS uses DataFrames as input which has
built-in optimizations and should give better performance
2. Am I correct to assume ml.recommen
rowid from your code is a variable in the driver, so it will be evaluated
once and then only the value is sent to words.map. You probably want to
have rowid be a lambda itself, so that it will get the value at the time it
is evaluated. For example if I have the following:
>>> data = sc.paralleli
Hi Ivan,
Since Spark 1.4.1 there is a Java-friendly function in LDAModel to get the
topic distributions called javaTopicDistributions() that returns a
JavaPairRDD. If you aren't able to upgrade, you can check out the
conversion used here
https://github.com/apache/spark/blob/v1.4.1/mllib/src/main/
Hi Praveen,
In MLLib, the major difference is that RandomForestClassificationModel
makes use of a newer API which utilizes ML pipelines. I can't say for
certain if they will produce the same exact result for a given dataset, but
I believe they should.
Bryan
On Wed, Jul 29, 2015 at 12:14 PM, pra
I'm not sure what the expected performance should be for this amount of
data, but you could try to increase the timeout with the property
"spark.akka.timeout" to see if that helps.
Bryan
On Sun, Apr 26, 2015 at 6:57 AM, Deepak Gopalakrishnan
wrote:
> Hello All,
>
> I'm trying to process a 3.5GB
68 matches
Mail list logo
