Re: [Users] Changing the default directory for simulations

Hi Ian, Thanks for this. It worked. Maitraya. On Fri, Aug 18, 2017 at 7:10 PM, Ian Hinder wrote: > > On 10 Aug 2017, at 15:08, Maitraya Bhattacharyya > wrote: > > Hi Ian, > > I have 24 physical cores with hyperthreading switched off. > > > Hi,

Re: [Users] Changing the default directory for simulations

On 10 Aug 2017, at 15:08, Maitraya Bhattacharyya wrote: > Hi Ian, > > I have 24 physical cores with hyperthreading switched off. Hi, And how many CPUs? If you have one CPU with 24 physical cores, then I think you want ppn = 24 max-num-threads = 24 num-threads =

Re: [Users] Changing the default directory for simulations

On 10 Aug 2017, at 12:29, Maitraya Bhattacharyya wrote: > Hi Ian, > > I noticed that there is a CESSI-BEAST.ini. I have 24 cores on my machine, I > did the following changes, > > ppn = 256 > max-num-threads = 256 > num-threads = 24 > nodes

Re: [Users] Changing the default directory for simulations

Hi, There isn't one, so I assume that I will have to create one ? Maitraya. On Thu, Aug 10, 2017 at 10:09 PM, Ian Hinder wrote: > > On 10 Aug 2017, at 11:32, Maitraya Bhattacharyya > wrote: > > Hi Ian, > > Sorry! I forgot to reply to all. > >

Re: [Users] Changing the default directory for simulations

Hi Ian, I noticed that there is a CESSI-BEAST.ini. I have 24 cores on my machine, I did the following changes, ppn = 256 max-num-threads = 256 num-threads = 24 nodes = 1 While running, I see the following: + set -e + cd

Re: [Users] Changing the default directory for simulations

Hi Ian, Sorry! I forgot to reply to all. My symfactory defs.local.ini is: [default] user= mkb14ip002 email = mkb14ip002 allocation = NO_ALLOCATION [CESSI-BEAST] user= mkb14ip002 email = mkb14ip002 allocation = NO_ALLOCATION basedir =

Re: [Users] Changing the default directory for simulations

On 10 Aug 2017, at 11:08, Maitraya Bhattacharyya wrote: > Hi Ian, > > I have got the basedir to work, but I cannot seem to change procs=1 > > Error: Too many nodes specified: nodes=20 (maxnodes is 1) > Aborting Simfactory. > > When I used ubuntu.in, the ppn there

Re: [Users] Changing the default directory for simulations

On 10 Aug 2017, at 10:06, Maitraya Bhattacharyya wrote: > Hi, > > Is there a way to change the default directory where simulations are saved > and also change the number of cores ? Hi, You can change the directory. It is called "basedir" and it is set in