35 MESZ schrieb Ondrej Valousek
> >>> :
> >>> Nope,
> >>> SoGE (as of 8.1.9) supports CGROUPS w/o any code changes, just add
> >>> ???USE_CGROUPS=yes??? to the exec parameter list to make shepherd use
> >>> CGroup saveset controller.
>
; wrote:
> >>>
> >>> Also a quick note: cgroups is the way to _enforce_ CPU affinity.
> >>> For vast majority of the jobs, I would say just a simple taskset
> >>> configuration (i.e. i.e. something like ???-l binding linear???) would do
> >&g
Message-
From: users-boun...@gridengine.org On Behalf Of
Mike Serkov
Sent: Thursday, August 29, 2019 4:50 PM
To: Skylar Thompson
Cc: users@gridengine.org
Subject: Re: [gridengine users] limit CPU/slot resource to the number of
reserved slots
Load average indeed. The thing is that if, we have a
(i.e. i.e. something like ???-l binding linear???) would do
>>> as well.
>>>
>>>
>>> From: Dietmar Rieder
>>> Sent: Thursday, August 29, 2019 9:37 AM
>>> To: users@gridengine.org; Ondrej Valousek ;
>>> users
>>> Subject: R
t; >
> > From: Dietmar Rieder
> > Sent: Thursday, August 29, 2019 9:37 AM
> > To: users@gridengine.org; Ondrej Valousek ;
> > users
> > Subject: Re: [gridengine users] limit CPU/slot resource to the number of
> > reserved slots
> >
> > Great, thank
:28 AM
To: Ondrej Valousek
Cc: Dietmar Rieder ; users@gridengine.org
Subject: Re: [gridengine users] limit CPU/slot resource to the number of
reserved slots
Also, something to keep in mind - cgroups will not solve this issue completely.
It is just affinity enforcement. If the job spawns multiple
> Sent: Monday, August 26, 2019 10:12 PM
> To: Dietmar Rieder ; Ondrej Valousek
> ; users
> Subject: Re: [gridengine users] limit CPU/slot resource to the number of
> reserved slots
>
> I don't think it's supported in Son of GridEngine. Ondrej Valousek (cc'd
; Ondrej Valousek ;
users
Subject: Re: [gridengine users] limit CPU/slot resource to the number of
reserved slots
Great, thanks so much!
Dietmar
Am 29. August 2019 09:05:35 MESZ schrieb Ondrej Valousek
mailto:ondrej.valou...@adestotech.com>>:
Nope,
SoGE (as of 8.1.9) supports CGROUPS w
y extends it to supports system and hence possibility to
>hard enforce memory/cpu limits, etc…
>Hth,
>Ondrej
>
>From: Daniel Povey
>Sent: Monday, August 26, 2019 10:12 PM
>To: Dietmar Rieder ; Ondrej Valousek
>; users
>Subject: Re: [gridengine users] limit CPU/slot resource t
: Daniel Povey
Sent: Monday, August 26, 2019 10:12 PM
To: Dietmar Rieder ; Ondrej Valousek
; users
Subject: Re: [gridengine users] limit CPU/slot resource to the number of
reserved slots
I don't think it's supported in Son of GridEngine. Ondrej Valousek (cc'd)
described in the first t
On Mon, Aug 26, 2019 at 02:15:22PM +0200, Dietmar Rieder wrote:
> Hi,
>
> may be this is a stupid question, but I'd like to limit the used/usable
> number of cores to the number of slots that were reserved for a job.
>
> We often see that people reserve 1 slot, e.g. "qsub -pe smp 1 [...]"
> but t
Hmmm changing the source code is not my intention.
But I'll have a look at the discussion you are referring to and see if I
change my mind.
Thanks
Dietmar
On 8/26/19 10:11 PM, Daniel Povey wrote:
> I don't think it's supported in Son of GridEngine. Ondrej Valousek
> (cc'd) described in the
Hi,
sure I can just kill those jobs, but this is exactly what I'd like to avoid.
Thanks
Dietmar
On 8/27/19 10:48 AM, Reuti wrote:
> Hi,
>
>> Am 26.08.2019 um 14:15 schrieb Dietmar Rieder :
>>
>> Hi,
>>
>> may be this is a stupid question, but I'd like to limit the used/usable
>> number of cor
[sorry for the (possibly) double post, they changed the mail server at the
university and now my mail application got confused and uses often a wrong smtp
server – not the one it claims to use]
Hi,
> Am 26.08.2019 um 14:15 schrieb Dietmar Rieder :
>
> Hi,
>
> may be this is a stupid question,
I don't think it's supported in Son of GridEngine. Ondrej Valousek (cc'd)
described in the first thread here
http://arc.liv.ac.uk/pipermail/sge-discuss/2019-August/thread.html
how he was able to implement it, but it required code changes, i.e. you
would need to figure out how to build and install
Hi,
thanks for your reply. This sounds promising.
We are using Son of Grid Engine though. Can you point me to the right
docs to get cgroup enabled in the exec host (CentOS 7). I must admit I
have no experience with cgroups.
Thanks again
Dietmar
On 8/26/19 4:03 PM, Skylar Thompson wrote:
> At l
At least for UGE, you will want to use the CPU set integration, which will
assign the job to a cgroup that has one CPU per requested slot. Once you
have cgroups enabled in the exec host OS, you can then set these options in
sge_conf:
cgroup_path=/cgroup
cpuset=1
You can use this mechanism to have
Hi,
may be this is a stupid question, but I'd like to limit the used/usable
number of cores to the number of slots that were reserved for a job.
We often see that people reserve 1 slot, e.g. "qsub -pe smp 1 [...]"
but their program is then running in parallel on multiple cores. How can
this be pr
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