Re: [OMPI users] Choices on how to implement a python module in MPI.

2007-02-04 Thread Tom Rosmond
Have you looked at the self-scheduling algorithm described in "USING MPI" by Gropp, Lusk, and Skjellum. I have seen efficient implementations of it for large satellite data assimilation problems in numerical weather prediction, where load distribution across processors cannot be predicted in advan

Re: [OMPI users] Can't run simple job with openmpi using the Intel compiler

2007-02-04 Thread Gurhan Ozen
On 2/2/07, Dennis McRitchie wrote: When I submit a simple job (described below) using PBS, I always get one of the following two errors: 1) [adroit-28:03945] [0,0,1]-[0,0,0] mca_oob_tcp_peer_recv_blocking: recv() failed with errno=104 2) [adroit-30:03770] [0,0,3]-[0,0,0] mca_oob_tcp_peer_comple

[OMPI users] Choices on how to implement a python module in MPI.

2007-02-04 Thread Bo Peng
Dear list, I have a python module written in C++ to help users manipulate a huge amount of genetics data. Using this module, users can write a script to create/load/manipulate data easily. For efficiency and memory management reasons, I would like to write a MPI version of the module so that I ca