Re: [OMPI users] Running Hetergenous MPI Application Over Infiniband

2008-05-05 Thread Brad Benton
Hello Ryan, I have been running a similar heterogeneous setup in my lab; i.e., a mix of ppc64 and x86_64 systems connected by ethernet and InfiniBand. In trying to replicate your problem, what I see is that it is not an issue of processor heterogeneity, but rather an issue with heterogeneous tran

Re: [OMPI users] Install BLACS and ScaLAPACK on Leopard

2008-05-05 Thread Linwei Wang
Dear Reeder, It does not work. I do think they are from the fortran programs I'm using (they are files included from the BLACS installation package, not written by my own. The thing is last time when I was using g77, it caused no problem... thanks for your help. Linwei. On M

Re: [OMPI users] Install BLACS and ScaLAPACK on Leopard

2008-05-05 Thread Doug Reeder
Linwei, Have you tried using -funderscoring with gfortran. I don't think the trouble you are having is caused by having g77 and gfortran both installed. Do you know where the unreferenced symbols (_s_wsle, _e_wsle, etc ) are supposed to be coming from. If they are in your fortran programs

Re: [OMPI users] Install BLACS and ScaLAPACK on Leopard

2008-05-05 Thread Linwei Wang
Dear Reeder, I've tried add gfortran flag "-fno-underscoring", but the same errors persist... Is that possible because that I have both g77 and gfortran in my computer? Best, Linwei On May 5, 2008, at 1:17 PM, Doug Reeder wrote: Linwei, Is there a problem with trailing underscore

Re: [OMPI users] Enabling progress thread

2008-05-05 Thread Jeff Squyres
I would make a stronger statement than that: progress threads are totally broken in v1.2. Don't bother trying them. On May 1, 2008, at 11:18 AM, Aurélien Bouteiller wrote: You can add --enable-progress-threads to the configure. However, please consider this as a beta feature. We know for sur

Re: [OMPI users] MPI_Lookup_name error

2008-05-05 Thread Pak Lui
Looking at the orignal email, it looks like Alberto might not have the persistent daemon up since he's using OMPI 1.2,, so he'll need to start the persistent daemon and establish a universe before the client server programs can connect (and probably would work for look up as well?!). These page

Re: [OMPI users] Install BLACS and ScaLAPACK on Leopard

2008-05-05 Thread Doug Reeder
Linwei, Is there a problem with trailing underscores. Are you linking c/c++ files with fortran. Do the _s_wsle family members need to have a trailing underscore where are the unrefernced symbols supposed to be coming from. If they have a trailing underscore in their names you probably nee

Re: [OMPI users] Install BLACS and ScaLAPACK on Leopard

2008-05-05 Thread Linwei Wang
Dear Dr. Simon, Do I need to remove g77 from my computer then? Since after installing gfortran (for Leopard), there is some link problem with gfortran.. When I try to build some routines in the BLACS, it gives error like: Undefined symbols: "_s_wsle", referenced from: _MAIN__ in tc_fC

Re: [OMPI users] machines swapping in running job[Scanned]

2008-05-05 Thread Jeff Squyres
Arif -- Sorry for the delay in replying. Believe it or not, almost this exact issue just came up with the IBM Benchmark Center; they were using Open MPI with MPIRandomAccess and experiencing problems with running out of memory. We didn't get a full set of data and experiments run; it was

Re: [OMPI users] MPI_Lookup_name error

2008-05-05 Thread Ralph Castain
I assume you are using some variant of OMPI 1.2? When last I checked, which admittedly was quite a while ago, this worked on the 1.2.x series. However, I note something here that may be a problem. In the 1.2.x series, we do not have a global publish/lookup service - the application doing the publi

Re: [OMPI users] setting the btl_tcp_eager_limit

2008-05-05 Thread jean-christophe.mig...@ens-lyon.fr
Dear George, First of all, many thanks for your quick response. George Bosilca wrote: The btl_tcp_sndbuf and btl_tcp_rcvbuf are limited by the kernel (usually 128K), so there is no reason to set them to something huge, if the kernel is unable to support these values. In fact, we did change t

Re: [OMPI users] Optimal distribution of low and high CPU processes on a heterogeneous cluster

2008-05-05 Thread Jeff Squyres
On Apr 25, 2008, at 2:27 PM, Roopesh Ojha wrote: For our application, some processes (manager and the datastreams) won't take much CPU power while others will. Our application first assigns the non-compute bound processes and then the high CPU power ones. Clearly we would like to be able t

Re: [OMPI users] Client/Server test

2008-05-05 Thread Jeff Squyres
There's been a lot of turnover in this exact portion of the code base on the SVN trunk in the last week or three. Ralph -- can you comment on where we are? On Apr 26, 2008, at 2:07 PM, Alberto Giannetti wrote: Doesn't seem to work. This is the appfile I'm using: # Application context files

Re: [OMPI users] IRIX Assembler messages unrecognized opcode > `leaf(opal_atomic_mb)

2008-05-05 Thread Jeff Squyres
Unfortunately, IRIX is not on our list of supported platforms -- there's no one on the current development team who supports it. If someone wants to join the Open MPI project and support IRIX, that would be great. :-) On Apr 26, 2008, at 12:37 PM, Daniel wrote: Dear Developers, I am n

Re: [OMPI users] Problems with gcc 4.3

2008-05-05 Thread Ilmar Wilbers
It seems as though this problem is fixed with version 1.2.6. I did not get the error when using the packages from Debin Sid who use this version instead of 1.2.5. ilmar Ilmar Wilbers wrote: Hi, This email is a follow-up to the following: http://www.open-mpi.org/community/lists/users/2007/12

[OMPI users] Problems with gcc 4.3

2008-05-05 Thread Ilmar Wilbers
Hi, This email is a follow-up to the following: http://www.open-mpi.org/community/lists/users/2007/12/4756.php I experience the same problems with gcc 4.3 and the Debias packages og openmpi for Ubuntu Hardy: cc1plus: warnings being treated as errors In file included from /usr/lib/openmpi/in

Re: [OMPI users] Install BLACS and ScaLAPACK on Leopard

2008-05-05 Thread Christian Simon
On 2 mai 08, at 15:05, Linwei Wang wrote: Dear Dr. Simon, I'm using gcc 4.0 (come with Leopard) and g77 3.4 g77 is outated. You have to switch to gfortran (it's descendant). It should work, and will be far more efficient. Be carefull to install a version consistent with your gcc. Keep us in