Re: [OMPI users] Problem compiling open mpi 1.3 with sunstudio12 express

2009-01-21 Thread Jeff Squyres
FWIW, I have run with my LD_LIBRARY_PATH set to a combination of multiple OMPI installations; it ended up using the leftmost entry in the LD_LIBRARY_PATH (as I intended). I'm not quite sure why it wouldn't do that for you. :-( On Jan 21, 2009, at 4:53 AM, Olivier Marsden wrote: -

Re: [OMPI users] openmpi 1.3 and --wdir problem

2009-01-21 Thread Ralph Castain
This is now fixed in the trunk and will be in the 1.3.1 release. Thanks again for the heads-up! Ralph On Jan 21, 2009, at 8:45 AM, Ralph Castain wrote: You are correct - that is a bug in 1.3.0. I'm working on a fix for it now and will report back. Thanks for catching it! Ralph On Jan 21,

Re: [OMPI users] One additional (unwanted) process when using dynamical process management

2009-01-21 Thread Ralph Castain
If you can, 1.3 would certainly be a good step to take. I'm not sure why 1.2.5 would be behaving this way, though, so it may indeed be something in the application (perhaps in the info key being passed to us?) that is the root cause. Still, if it isn't too much trouble, moving to 1.3 will

Re: [OMPI users] One additional (unwanted) process when using dynamical process management

2009-01-21 Thread Evgeniy Gromov
Dear Ralph, Thanks for your reply. I encountered this problem using openmpi-1.2.5, on a Opteron cluster with Myrinet-mx. I tried for compilation of Global Arrays different compilers (gfortran, intel, pathscale), the result is the same. As I mentioned in the previous message GA itself works

Re: [OMPI users] One additional (unwanted) process when using dynamical process management

2009-01-21 Thread Ralph Castain
Not that I've seen. What version of OMPI are you using, and on what type of machine/environment? On Jan 21, 2009, at 11:02 AM, Evgeniy Gromov wrote: Dear OpenMPI users, I have the following (problem) related to OpenMPI: I have recently compiled with OPenMPI the new (4-1) Global Arrays

[OMPI users] One additional (unwanted) process when using dynamical process management

2009-01-21 Thread Evgeniy Gromov
Dear OpenMPI users, I have the following (problem) related to OpenMPI: I have recently compiled with OPenMPI the new (4-1) Global Arrays package using ARMCI_NETWORK=MPI-SPAWN, which implies the use of dynamic process management realised in MPI2. It got compiled and tested successfully. However

Re: [OMPI users] openmpi 1.3 and --wdir problem

2009-01-21 Thread Ralph Castain
You are correct - that is a bug in 1.3.0. I'm working on a fix for it now and will report back. Thanks for catching it! Ralph On Jan 21, 2009, at 3:22 AM, Geoffroy Pignot wrote: Hello I'm currently trying the new release but I cant reproduce the 1.2.8 behaviour concerning --wdir

Re: [OMPI users] dead lock in MPI_Finalize

2009-01-21 Thread Tim Mattox
Can you send all the information listed here: http://www.open-mpi.org/community/help/ On Wed, Jan 21, 2009 at 8:58 AM, Bernard Secher - SFME/LGLS wrote: > Hello, > > I have a case wher i have a dead lock in MPI_Finalize() function with > openMPI v1.3. > > Can some body

Re: [OMPI users] Restarting from a checkpoint (OMPI 1.3)

2009-01-21 Thread Josh Hursey
Gregor, Thanks for the bug report. I saw a problem similar to this a few months ago (documented in the ticket below). https://svn.open-mpi.org/trac/ompi/ticket/1527 Though we fixed the accounting information, the patch I had for orte- restart to switch it away from using --hostfile and

[OMPI users] dead lock in MPI_Finalize

2009-01-21 Thread Bernard Secher - SFME/LGLS
Hello, I have a case wher i have a dead lock in MPI_Finalize() function with openMPI v1.3. Can some body help me please? Bernard

[OMPI users] openmpi 1.3 and --wdir problem

2009-01-21 Thread Geoffroy Pignot
Hello I'm currently trying the new release but I cant reproduce the 1.2.8 behaviour concerning --wdir option Then %% /tmp/openmpi-1.2.8/bin/mpirun -n 1 --wdir /tmp --host r003n030 pwd : --wdir /scr1 -n 1 --host r003n031 pwd /scr1 /tmp but %% /tmp/openmpi-1.3/bin/mpirun

Re: [OMPI users] Problem compiling open mpi 1.3 with sunstudio12 express

2009-01-21 Thread Olivier Marsden
- Check that /opt/mpi_sun and /opt/mpi_gfortran* are actually distinct subdirectories; there's no hidden sym/hard links in there somewhere (where directories and/or individual files might accidentally be pointing to the other tree) no hidden links in the directories - does "env | grep