Re: [OMPI users] OpenMPI without IPoIB

2009-11-25 Thread Don Kerr
On 11/25/09 02:04, Vivek Satpute wrote: Hi, I tried to execute OpenMPI examples from OFED-1.4 stack and found that all those examples uses IPoIB. How are you determining that it is using IPoIB? Is there any way to execute MPI applications on only Infiniband stack i.e. without using IPoIB

Re: [OMPI users] benchmark - mpi_reduce() called only once but takes long time - proportional to calculation time

2009-11-25 Thread Eugene Loh
Your processes are probably running asynchronously. You could perhaps try tracing program execution and look at the timeline. E.g., http://www.open-mpi.org/faq/?category=perftools#free-tools . Or, where you have MPI_Wtime calls, just capture those timestamps on each process and dump the resu

[OMPI users] benchmark - mpi_reduce() called only once but takes long time - proportional to calculation time

2009-11-25 Thread Qing Pang
Dear users, I'm running the popular Calculate PI program on a 2 node setting running ubuntu 8.10 and openmpi1.3.3(with default settings). Password-less ssh is set up but no cluster management program such as network file system, network time protocol, resource management, scheduler, etc. The t

Re: [OMPI users] Programming help required in Interleaving computation+communication !

2009-11-25 Thread Atle Rudshaug
souvik bhattacherjee wrote: Hi all, I'm trying to interleave computation with communication. As a result, I have resorted to using MPI with POSIX threads. Primarily, I am trying to communicate a partial vector v3 while computing an inner product v1*v2 (mod q). To give you an idea of the platf

Re: [OMPI users] Help tracing casue of readv errors

2009-11-25 Thread Ashley Pittman
On Wed, 2009-11-25 at 12:36 +0100, Atle Rudshaug wrote: > I got a similar error when using non-blocking communication on large > datasets. I could not figure out why this was happening, since it seemed > sort of random. I eventually bypassed the problem by switching to > blocking communication,

Re: [OMPI users] Help tracing casue of readv errors

2009-11-25 Thread Atle Rudshaug
Pacey, Mike wrote: One my users recently reported random hangs of his OpenMPI application. I've run some tests using multiple 2-node 16-core runs of the IMB benchmark and can occasionally replicate the problem. Looking through the mail archive, a previous occurrence of this error seems to been su

[OMPI users] OpenMPI without IPoIB

2009-11-25 Thread Vivek Satpute
Hi, I tried to execute OpenMPI examples from OFED-1.4 stack and found that all those examples uses IPoIB. Is there any way to execute MPI applications on only Infiniband stack i.e. without using IPoIB module ? Can we execute MPI applications using libibverbs, librdma, or some other libraries ?

Re: [OMPI users] How to install openmpi to suport thread_level_multiple?

2009-11-25 Thread Vivek Satpute
Hi, As much as I know about OMPI, THREAD_LEVEL_MULTIPLE value is set to "yes" by default. -Vivek On Tue, Nov 24, 2009 at 11:04 PM, Luís Miranda wrote: > > > > > How to install openmpi to suport thread_level_multiple? > > > ___ > users mailing list > u