[OMPI users] Enabling IPsec

2010-05-15 Thread awwase
Dear all, I would like to know if it is possible to enable IPsec in openMPI. I would like to enable it to do some measurements on the performance. Thanks in advance. Regards, Eisa Al Shamsi

Re: [OMPI users] Question on virtual memory allocated

2010-05-15 Thread Olivier Riff
Thank you Jeff for your explaination. It is much clearer now. Best regards. Olivier 2010/5/15 Jeff Squyres > On May 12, 2010, at 8:19 AM, Olivier Riff wrote: > > > What I do not understand is where the value of 2104m for the virtual > memory comes from. > > When I add the value of Mem used (77

Re: [OMPI users] getc in openmpi

2010-05-15 Thread Ralph Castain
On May 12, 2010, at 1:01 PM, Fernando Lemos wrote: > On Wed, May 12, 2010 at 2:51 PM, Jeff Squyres wrote: >> On May 12, 2010, at 1:48 PM, Hanjun Kim wrote: >> >>> I am working on parallelizing my sequential program using OpenMPI. >>> Although I got performance speedup using many threads, there

Re: [OMPI users] MPI_FILE_SET_ERRHANDLER returns an error withMPI_FILE_NULL

2010-05-15 Thread Jeff Squyres
Yes, this is a bug. Thanks for identifying the issue! I have committed a fix to our development tree and have filed to have it moved into the 1.4 and 1.5 series. You can download a patch for the specific fix here: https://svn.open-mpi.org/trac/ompi/changeset/23145 On May 7, 2010, at 4:5

Re: [OMPI users] Segmentation fault at program end with 2+ processes

2010-05-15 Thread Jeff Squyres
Ouch. These are the worst kinds of bugs to find. :-( If you attach a debugger to these processes and step through the final death throes of the process, does it provide any additional insight? I have not infrequently done stuff like this: { int i = 0; printf("Process %d ready to

Re: [OMPI users] 'readv failed: Connection timed out' issue

2010-05-15 Thread Jeff Squyres
On May 10, 2010, at 11:00 AM, Guanyinzhu wrote: > Did "--mca mpi_preconnect_all 1" work? > > I also face this problem "readv failed: connection time out" in the > production environment, and our engineer has reproduced this scenario at 20 > nodes with gigabye ethernet and limit one ethernet sp

Re: [OMPI users] openmpi + share points

2010-05-15 Thread Jeff Squyres
Sorry for the delay in replying. It is probably much easier to NFS share the installation directory so that the exact same installation directory is available on all nodes. For example, if you installed OMPI into /opt/openmpi-1.4.2, then make /opt/openmpi-1.4.2 available on all nodes (even if

Re: [OMPI users] Open MPI 1.4.2 released

2010-05-15 Thread Jeff Squyres
On May 13, 2010, at 3:20 PM, Aleksej Saushev wrote: > > - Various OpenBSD and NetBSD build and run-time fixes. Many thanks to > > the OpenBSD community for their time, expertise, and patience > > getting these fixes incorporated into Open MPI's main line. > > This didn't happen in 1.4.2, all

Re: [OMPI users] Question on virtual memory allocated

2010-05-15 Thread Jeff Squyres
On May 12, 2010, at 8:19 AM, Olivier Riff wrote: > What I do not understand is where the value of 2104m for the virtual memory > comes from. > When I add the value of Mem used (777848k) to the value of the cache > (339184k) : the amount is by far inferior to the Virtual memory (2104m). > Are her