Re: [OMPI users] Potential bug in creating MPI_GROUP_EMPTY handling

2011-03-17 Thread Dominik Goeddeke
glad we could help and the two hours of stripping things down were effectively not wasted. Also good to hear (implicitly) that we were not too stupid to understand the MPI standard... Since to the best of my understanding, our workaround is practically overhead-free, we went ahead and coded ev

Re: [OMPI users] Building OpenMPI on Windows 7

2011-03-17 Thread Shiqing Fan
Hi Hiral, > There is no f90 bindings at moment for Windows. Any idea when this available? At moment, no. But only if there is strong requirements. Regards, Shiqing Thank you. -Hiral On Thu, Mar 17, 2011 at 5:21 PM, Shiqing Fan > wrote: I tried building openmpi-1

Re: [OMPI users] Error in Binding MPI Process to a socket

2011-03-17 Thread Ralph Castain
That is an awfully old kernel, so it may indeed not have support for binding. I'd have to defer to someone more knowledgable to say for sure, but you might consider updating to something newer. On Mar 17, 2011, at 1:57 PM, vaibhav dutt wrote: > 2.6.9-78.0.17.ELpapismp #1 SMP Tue Apr 7 13:14:04

Re: [OMPI users] Error in Binding MPI Process to a socket

2011-03-17 Thread vaibhav dutt
2.6.9-78.0.17.ELpapismp #1 SMP Tue Apr 7 13:14:04 CDT 2009 x86_64 x86_64 x86_64 GNU/Linux On Thu, Mar 17, 2011 at 2:55 PM, Ralph Castain wrote: > What OS version is it? > > uname -a > > will tell you, if you are on linux. > > On Mar 17, 2011, at 1:31 PM, vaibhav dutt wrote: > > Hi, > > Thanks f

Re: [OMPI users] Error in Binding MPI Process to a socket

2011-03-17 Thread Ralph Castain
What OS version is it? uname -a will tell you, if you are on linux. On Mar 17, 2011, at 1:31 PM, vaibhav dutt wrote: > Hi, > > Thanks for your reply. I tried to execute first a process by using > > mpirun -machinefile hostfile.txt --slot-list 0:1 -np 1 > > but it gives the same as error a

Re: [OMPI users] Error in Binding MPI Process to a socket

2011-03-17 Thread vaibhav dutt
Hi, Thanks for your reply. I tried to execute first a process by using mpirun -machinefile hostfile.txt --slot-list 0:1 -np 1 but it gives the same as error as mentioned previously. Then, I created a rankfile with contents" rank 0=t1.tools.xxx slot=0:0 rank 1=t1.tools.xxx slot=1:0. and t

Re: [OMPI users] Error in Binding MPI Process to a socket

2011-03-17 Thread Ralph Castain
The error is telling you that your OS doesn't support queries telling us what cores are on which sockets, so we can't perform a "bind to socket" operation. You can probably still "bind to core", so if you know what cores are in which sockets, then you could use the rank_file mapper to assign pro

[OMPI users] Error in Binding MPI Process to a socket

2011-03-17 Thread vaibhav dutt
Hi, I am trying to perform an experiment in which I can spawn 2 MPI processes, one on each socket in a 4 core node having 2 dual cores. I used the option "bind to socket" which mpirun for that but I am getting an error like: An attempt was made to bind a process to a specific hardware topology m

Re: [OMPI users] gadget2 infiniband openmpi hang

2011-03-17 Thread Jeff Squyres
Are you able to run if you use --mca btl_openib_cpc_include rdmacm ? On Mar 17, 2011, at 10:57 AM, Craig West wrote: > Hi, > I'm a system administrator trying to help users resolve gadget 2 code hangs > doing MPI_Sendrecv (similar to > http://www.open-mpi.org/community/lists/users/2010/05/1305

Re: [OMPI users] Potential bug in creating MPI_GROUP_EMPTY handling

2011-03-17 Thread Jeff Squyres
Sorry for the late reply, but many thanks for the bug report and reliable reproducer. I've confirmed the problem and filed a bug about this: https://svn.open-mpi.org/trac/ompi/ticket/2752 On Mar 6, 2011, at 6:12 PM, Dominik Goeddeke wrote: > The attached example code (stripped down from

Re: [OMPI users] Connection Errors: Socket is not connected (57) but works for a one messages to each place at first. Works on machine order.

2011-03-17 Thread Jeff Squyres
Sorry for the delayed reply. Is there any chance you can upgrade to the latest version of Open MPI? Also, I'm not an IPv6 expert -- could you try disabling IPv6? (I can't tell offhand from your output whether it's enabled or disabled) I say this because we *did* have a whacko problem on OS X r

Re: [OMPI users] OpenMPI 1.2.x segfault as regular user

2011-03-17 Thread Jeff Squyres
Sorry for the delayed reply. I'm afraid I haven't done much with SE Linux -- I don't know if there are any "gotchas" that would show up there. SE Linux support is not something we've gotten a lot of request for. I doubt that anyone in the community has done much testing in this area. :-\ I

Re: [OMPI users] Segmentation faults

2011-03-17 Thread Jeff Squyres
Sorry for the delay in replying. You might want to run your code through a debugger, particularly a memory-checking debugger. Your stack trace shows that it's segv'ing in main(), so it might not be that difficult to find. On Mar 8, 2011, at 12:48 AM, arep isa wrote: > Hi, > I need to use Ope

[OMPI users] gadget2 infiniband openmpi hang

2011-03-17 Thread Craig West
Hi, I'm a system administrator trying to help users resolve gadget 2 code hangs doing MPI_Sendrecv (similar to http://www.open-mpi.org/community/lists/users/2010/05/13057.php). I'm trying to determine appropriate values for mpool_rdma_rcache_size_limit for our hardware, and to make sure RDMA settin

[OMPI users] Comparison among OpenMPI, MPICH2 and MSPICH on Windows

2011-03-17 Thread hi
Hi, Does anybody have idea about... Where I can get comparison of OpenMPI, MPICH2 and MSPICH? What they support and Which one is performance wise better on Windows platform ? Thank you in advance. -Hiral

Re: [OMPI users] Building OpenMPI on Windows 7

2011-03-17 Thread hi
Hi Shiqing, Yes, it was parameter (MPI_STATUS_SIZE=) in mpif-config.h file. BTW: see the attached CMakeCache.txt. > There is no f90 bindings at moment for Windows. Any idea when this available? Thank you. -Hiral On Thu, Mar 17, 2011 at 5:21 PM, Shiqing Fan wrote: > > I tried building openmp

Re: [OMPI users] Building OpenMPI on Windows 7

2011-03-17 Thread Shiqing Fan
I tried building openmpi-1.5.2 on Windows 7 (as described below environment) with OMPI_WANT_F77_BINDINGS_ON and OMPI_WANT_F90_BINDINGS_ON using "ifort". I observed that it has generated mpif77.exe but didn't generated mpif90.exe, any idea??? There is no f90 bindings at moment for Windows. B

Re: [OMPI users] Building OpenMPI on Windows 7

2011-03-17 Thread hi
Hi, I tried building openmpi-1.5.2 on Windows 7 (as described below environment) with OMPI_WANT_F77_BINDINGS_ON and OMPI_WANT_F90_BINDINGS_ON using "ifort". I observed that it has generated mpif77.exe but didn't generated mpif90.exe, any idea??? BTW: while using above generated mpif77.exe to com