[OMPI users] asa...@gmail.com has indicated you're a friend. Accept?

2014-10-29 Thread asad06
Hi, asa...@gmail.com wants to follow you. ** Is asa...@gmail.com you friend? ** If Yes please follow the link below: http://invites.infoaxe.net/signup_e.html?fullname=Open+Mpi+Users&email=us...@open-mpi.org&invitername=asad06&inviterid=33387418&userid=0&token=0&emailmasterid=83297034-2e7b

Re: [OMPI users] java.lang.ArrayIndexOutOfBoundsException in openmpi-dev-178-ga16c1e4

2014-10-29 Thread Oscar Vega-Gisbert
Hi, There is an error in the program. First you declare a 256 char buffer (BUF_SIZE = 256). When it is executed the line 96: buffer = (MPI.getProcessorName()).toCharArray(); The buffer length becomes less than 256. So, when the next iteration is executed, at line 92 you could get an except

Re: [OMPI users] java.lang.ArrayIndexOutOfBoundsException in openmpi-dev-178-ga16c1e4

2014-10-29 Thread Ralph Castain
Looks to me like a buffer isn’t getting initialized to NULL - the message is correct (as is the length), but the rest of the array is random garbage. However, note that MPI messages don’t initialize their buffers for performance reasons. So your program should only be checking the first 6 bytes

[OMPI users] java.lang.ArrayIndexOutOfBoundsException in openmpi-dev-178-ga16c1e4

2014-10-29 Thread Siegmar Gross
Hi, today a tested some small Java programs with openmpi-dev-178-ga16c1e4. One program throws an exception ArrayIndexOutOfBoundsException. The program worked fine in older MPI versions, e.g., openmpi-1.8.2a1r31804. tyr java 138 mpiexec -np 2 java MsgSendRecvMain Now 1 process sends its greeting

Re: [OMPI users] Allgather in OpenMPI 1.4.3

2014-10-29 Thread Jeff Squyres (jsquyres)
Can you at least upgrade to 1.4.5? That's the last release in the 1.4.x series. Note that you can always install Open MPI as a normal/non-root user (e.g., install it into your $HOME, or some such). On Oct 28, 2014, at 12:08 PM, Sebastian Rettenberger wrote: > Hi, > > I know 1.4.3 is really

Re: [OMPI users] SIGBUS in openmpi-dev-178-ga16c1e4 on Solaris 10Sparc

2014-10-29 Thread Siegmar Gross
Hi Gilles, > i think i found the alignment issue and fixed it (commit > 8c556bbc66c06fb19c6e46c67624bac1d6719b12) > > here is attached the patch that fixes the issue. Great, the problems are solved with the patch as far as I can say today! Thank you very much for your help. Today I could only t

Re: [OMPI users] SIGBUS in openmpi-dev-178-ga16c1e4 on Solaris 10 Sparc

2014-10-29 Thread Gilles Gouaillardet
Hi Siegmar, thanks for the detailled report. i think i found the alignment issue and fixed it (commit 8c556bbc66c06fb19c6e46c67624bac1d6719b12) here is attached the patch that fixes the issue. Cheers, Gilles On 2014/10/29 5:24, Siegmar Gross wrote: > Hi Gilles, > >> From the jvm logs, there