Re: [OMPI users] --host works but --hostfile does not

From “man mpirun” - note that not specifying “slots=N” in a hostfile defaults to slots=#cores on that node (as it states in the text): Specifying Host Nodes Host nodes can be identified on the mpirun command line with the -host option or in a hostfile. For example,

Re: [OMPI users] disable slurm/munge from mpirun

I gather you are using OMPI 2.x, yes? And you configured it --with-pmi=, then moved the executables/libs to your workstation? I suppose I could state the obvious and say “don’t do that - just rebuild it”, and I fear that (after checking the 2.x code) you really have no choice. OMPI v3.0 will

Re: [OMPI users] disable slurm/munge from mpirun

On Thu, Jun 22, 2017 at 10:43 AM, John Hearns via users wrote: > Having had some problems with ssh launching (a few minutes ago) I can > confirm that this works: > > --mca plm_rsh_agent "ssh -v" this doesn't do anything for me if i set OMPI_MCA_sec=^munge i can clear

[OMPI users] --host works but --hostfile does not

I am just learning to use openmpi 1.8.4 that is installed on our cluster. I am running into a baffling issue. If I run: mpirun -np 3 --host b1,b2,b3 hostname I get the expected output: b1 b2 b3 But if I do: mpirun -np 3 --hostfile hostfile hostname I get: b1 b1 b1 Where hostfile contains:

[OMPI users] Openmpi with btl_openib_ib_service_level

I may have asked this recently (if so sorry). If anyoen has worked with QoS settings with OpenMPI please ping me off list, eg mpirun --mca btl_openib_ib_service_level N ___ users mailing list users@lists.open-mpi.org

Re: [OMPI users] disable slurm/munge from mpirun

Having had some problems with ssh launching (a few minutes ago) I can confirm that this works: --mca plm_rsh_agent "ssh -v" Stupidly I thought there was a majr problem - when it turned otu I could not ssh into a host.. ahem. On 22 June 2017 at 16:35, r...@open-mpi.org

Re: [OMPI users] disable slurm/munge from mpirun

that took care of one of the errors, but i missed a re-type on the second error mca_base_component_repository_open: unable to open mca_pmix_pmix112: libmunge missing and the opal_pmix_base_select error is still there (which is what's actually halting my job) On Thu, Jun 22, 2017 at 10:35 AM,

Re: [OMPI users] disable slurm/munge from mpirun

You can add "OMPI_MCA_plm=rsh OMPI_MCA_sec=^munge” to your environment > On Jun 22, 2017, at 7:28 AM, John Hearns via users > wrote: > > Michael, try > --mca plm_rsh_agent ssh > > I've been fooling with this myself recently, in the contect of a PBS cluster > > On

Re: [OMPI users] disable slurm/munge from mpirun

Michael, try --mca plm_rsh_agent ssh I've been fooling with this myself recently, in the contect of a PBS cluster On 22 June 2017 at 16:16, Michael Di Domenico wrote: > is it possible to disable slurm/munge/psm/pmi(x) from the mpirun > command line or (better) using

[OMPI users] disable slurm/munge from mpirun

is it possible to disable slurm/munge/psm/pmi(x) from the mpirun command line or (better) using environment variables? i'd like to use the installed version of openmpi i have on a workstation, but it's linked with slurm from one of my clusters. mpi/slurm work just fine on the cluster, but when i

[OMPI users] open program to profiling my openMPI code

Dear all, I have done a program with gfortran\fortran and openMPI. I would like to profile it. Can someone suggest me a open program to profile it? I have done some Internet researches but I have no enough information to choose the best one. Thanks in advance to all of you. Diego