Gary, are you using Modules?
http://www.admin-magazine.com/HPC/Articles/Environment-Modules
On 22 August 2017 at 02:04, Gilles Gouaillardet wrote:
> Gary,
>
>
> one option (as mentioned in the error message) is to configure Open MPI
> with --enable-orterun-prefix-by-default.
>
> this will force
John,
Modules (both legacy and LMod) are great but might not be relevant here :
my understanding is that in this case, "module load openmpi" would be
required in the .bashrc,
and this is something that should be avoided.
Cheers,
Gilles
On Tue, Aug 22, 2017 at 4:50 PM, John Hearns via users
wro
I’m using a build of OpenMPI provided by a third party.
--
Gary Jackson, Ph.D.
Johns Hopkins University Applied Physics Laboratory
On 8/21/17, 8:04 PM, "users on behalf of Gilles Gouaillardet"
wrote:
Gary,
one option (as mentioned in the error message) is to configure Open M
Would
$ mpirun -x LD_LIBRARY_PATH ...
work here? I think from the man page for mpirun that should request
that it would would export the currently set value of LD_LIBRARY_PATH
to the remote nodes prior to executing the command there.
-- bennet
On Tue, Aug 22, 2017 at 11:55 AM, Jackson, G
I’m afraid not - that only applies the variable to the application, not the
daemons.
Truly, your only real option is to put something in your .bashrc since you
cannot modify the configure.
Or, if you are running in a managed environment, you can ask to have your
resource manager forward your e
Yup. It looks like I’m stuck with .bashrc.
Thank you all for the suggestions.
--
Gary Jackson, Ph.D.
Johns Hopkins University Applied Physics Laboratory
On 8/22/17, 1:07 PM, "users on behalf of r...@open-mpi.org"
wrote:
I’m afraid not - that only applies the variable to the application,
Am 22.08.2017 um 02:04 schrieb Gilles Gouaillardet:
> Gary,
>
>
> one option (as mentioned in the error message) is to configure Open MPI with
> --enable-orterun-prefix-by-default.
>
> this will force the build process to use rpath, so you do not have to set
> LD_LIBRARY_PATH
>
> this is th
Not really,
you have the option of using an orte_launch_agent i described in a
previous email
Cheers,
Gilles
On Wed, Aug 23, 2017 at 2:43 AM, Jackson, Gary L.
wrote:
> Yup. It looks like I’m stuck with .bashrc.
>
> Thank you all for the suggestions.
>
> --
> Gary Jackson, Ph.D.
> Johns Hopkins
