Re: [OMPI users] OpenMPI building fails on Windows Linux Subsystem(WLS).

2018-09-19 Thread John Hearns via users
Oleg, I can build the latest master branch of OpenMPI in WSL I can give it a try with 3.1.2 if that is any help to you? uname -a Linux Johns-Spectre 4.4.0-17134-Microsoft #285-Microsoft Thu Aug 30 17:31:00 PST 2018 x86_64 x86_64 x86_64 GNU/Linux apt-get upgrade apt-get install gfortran wget

Re: [OMPI users] How do I build 3.1.0 (or later) with mellanox's libraries

2018-09-19 Thread Barrett, Brian via users
Yeah, there’s no good answer here from an “automatically do the right thing” point of view. The reachable:netlink component (which is used for the TCP BTL) only works with libnl-3 because libnl-1 is a real pain to deal with if you’re trying to parse route behaviors. It will do the right thing

Re: [OMPI users] OpenMPI building fails on Windows Linux Subsystem(WLS).

2018-09-19 Thread John Hearns via users
Oleg, I have a Windows 10 system and could help by testing this also. But I have to say - it will be quicker just to install VirtualBox and a CentOS VM. Or an Ubuntu VM. You can then set up a small test network of VMs using the VirtualBox HostOnly network for tests of your MPI code. On Wed, 19

Re: [OMPI users] How do I build 3.1.0 (or later) with mellanox's libraries

2018-09-19 Thread Jeff Squyres (jsquyres) via users
Alan -- Sorry for the delay. I agree with Gilles: Brian's commit had to do with "reachable" plugins in Open MPI -- they do not appear to be the problem here. >From the config.log you sent, it looks like configure aborted because you >requested UCX support (via --with-ucx) but configure wasn't

Re: [OMPI users] OpenMPI building fails on Windows Linux Subsystem(WLS).

2018-09-19 Thread Jeff Squyres (jsquyres) via users
I can't say that we've tried to build on WSL; the fact that it fails is probably not entirely unsurprising. :-( I looked at your logs, and although I see the compile failure, I don't see any reason *why* it failed. Here's the relevant fail from the tar_openmpi_fail file: - 5523 Making

Re: [OMPI users] [version 2.1.5] invalid memory reference

2018-09-19 Thread Jeff Squyres (jsquyres) via users
Yeah, it's a bit terrible, but we didn't reliably reproduce this problem for many months, either. :-\ As George noted, it's been ported to all the release branches but is not yet in an official release. Until an official release (4.0.0 just had an rc; it will be released soon, and 3.0.3 will

Re: [OMPI users] Unable to spawn MPI processes on multiple nodes with recent version of OpenMPI

2018-09-19 Thread Andrew Benson
On further investigation removing the "preconnect_all" option does change the problem at least. Without "preconnect_all" I no longer see: -- At least one pair of MPI processes are unable to reach each other for MPI

Re: [OMPI users] Unable to spawn MPI processes on multiple nodes with recent version of OpenMPI

2018-09-19 Thread Andrew Benson
On further investigation removing the "preconnect_all" option does change the problem at least. Without "preconnect_all" I no longer see: -- At least one pair of MPI processes are unable to reach each other for MPI

Re: [OMPI users] [version 2.1.5] invalid memory reference

2018-09-19 Thread George Bosilca
I can't speculate on why you did not notice the memory issue before, simply because for months we (the developers) didn't noticed and our testing infrastructure didn't catch this bug despite running millions of tests. The root cause of the bug was a memory ordering issue, and these are really