Re: [OMPI users] IBM Spectrum MPI problem

2017-05-19 Thread Nysal Jan K A
hi Gabriele, You can check some of the available options here - https://www.ibm.com/support/knowledgecenter/en/SSZTET_10.1.0/smpi02/smpi02_interconnect.html The "-pami_noib" option might be of help in this scenario. Alternatively, on a single node, the vader BTL can also be used. Regards --Nysal

Re: [OMPI users] [EXTERNAL] Re: Errors on POWER8 Ubuntu 14.04u2

2015-03-30 Thread Nysal Jan K A
If this is Power 8 in LE mode, its most likely a libtool issue. You need libtool >= 2.4.3, which has the LE patches, and need to run autogen.pl again. I have an issue open for this - https://github.com/open-mpi/ompi/issues/396 Regards --Nysal On Sat, Mar 28, 2015 at 12:41 AM, Hammond, Simon David

Re: [OMPI users] Open MPI vs IBM MPI performance help

2010-12-03 Thread Nysal Jan
Collecting MPI Profile information might help narrow down the issue. You could use some of the tools mentioned here - http://www.open-mpi.org/faq/?category=perftools --Nysal On Wed, Dec 1, 2010 at 11:59 PM, Price, Brian M (N-KCI) < brian.m.pr...@lmco.com> wrote: > OpenMPI version: 1.4.3 > > Pla

Re: [OMPI users] EXTERNAL: Re: Creating 64-bit objects?

2010-11-11 Thread Nysal Jan
n. > > > > Brian > > > > > > *From:* users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] *On > Behalf Of *Nysal Jan > *Sent:* Wednesday, November 10, 2010 12:19 AM > *To:* Open MPI Users > *Subject:* EXTERNAL: Re: [OMPI users] Creating 64-bit obj

Re: [OMPI users] Creating 64-bit objects?

2010-11-11 Thread Nysal Jan
the same issue occur in OMPI 1.5? > > Should we put in a local patch for OMPI 1.4.x and/or OMPI 1.5? (we've done > this before while waiting for upstream Libtool patches to be released, etc.) > > > > On Nov 10, 2010, at 2:19 AM, Nysal Jan wrote: > > > Hi Brian, &

Re: [OMPI users] Creating 64-bit objects?

2010-11-10 Thread Nysal Jan
Hi Brian, This problem was first reported by Paul H. Hargrove in the developer mailing list. It is a bug in libtool and has been fixed in the latest release (2.2.8). More details are available here - http://www.open-mpi.org/community/lists/devel/2010/10/8606.php Regards --Nysal On Wed, Nov 10, 20

Re: [OMPI users] [openib] segfault when using openib btl

2010-09-29 Thread Nysal Jan
t;>>>>>>>>> messages size are > > >>>>>>>>>>> > > >>>>>>>>>>>> 10k but can be very much larger. > > >>>>>>>>>>> > > >>>>>>>>&g

Re: [OMPI users] [openib] segfault when using openib btl

2010-09-17 Thread Nysal Jan
Hi Eloi, Sorry for the delay in response. I haven't read the entire email thread, but do you have a test case which can reproduce this error? Without that it will be difficult to nail down the cause. Just to clarify, I do not work for an iwarp vendor. I can certainly try to reproduce it on an IB sy

Re: [OMPI users] Checksuming in openmpi 1.4.1

2010-09-01 Thread Nysal Jan
Hi Gilbert, Checksums are turned off by default. If you need checksums to be activated add "-mca pml csum" to the mpirun command line. Checksums are enabled only for inter-node communication. Intra-node communication is typically over shared memory and hence checksum is disabled for this case. If y

Re: [OMPI users] [openib] segfault when using openib btl

2010-08-17 Thread Nysal Jan
te an invalid > memory access allowing to understand why reg->cbfunc / hdr->tag are null. > > Do you think that a thread race condition could explain the hdr->tag value > ? > > Thanks for your help, > Eloi > > On Monday 16 August 2010 20:46:39 Nysal Jan wrote: &

Re: [OMPI users] [openib] segfault when using openib btl

2010-08-16 Thread Nysal Jan
The value of hdr->tag seems wrong. In ompi/mca/pml/ob1/pml_ob1_hdr.h #define MCA_PML_OB1_HDR_TYPE_MATCH (MCA_BTL_TAG_PML + 1) #define MCA_PML_OB1_HDR_TYPE_RNDV (MCA_BTL_TAG_PML + 2) #define MCA_PML_OB1_HDR_TYPE_RGET (MCA_BTL_TAG_PML + 3) #define MCA_PML_OB1_HDR_TYPE_ACK (MCA_BT

Re: [OMPI users] Memory allocation error when linking with MPI libraries

2010-08-15 Thread Nysal Jan
ibc instead of openmpi one, but does > it have an effect on performance or something else ? > > Nicolas > > 2010/8/8 Nysal Jan > > What interconnect are you using? Infiniband? Use >> "--without-memory-manager" option while building ompi in order to disable >

Re: [OMPI users] Bug in POWERPC32.asm?

2010-08-09 Thread Nysal Jan
Thanks for reporting this Matthew. Fixed in r23576 ( https://svn.open-mpi.org/trac/ompi/changeset/23576) Regards --Nysal On Fri, Aug 6, 2010 at 10:38 PM, Matthew Clark wrote: > I was looking in my copy of openmpi-1.4.1 opal/asm/base/POWERPC32.asm > and saw the following: > > START_FUNC(opal_sys_

Re: [OMPI users] Memory allocation error when linking with MPI libraries

2010-08-08 Thread Nysal Jan
What interconnect are you using? Infiniband? Use "--without-memory-manager" option while building ompi in order to disable ptmalloc. Regards --Nysal On Sun, Aug 8, 2010 at 7:49 PM, Nicolas Deladerriere < nicolas.deladerri...@gmail.com> wrote: > Yes, I'am using 24G machine on 64 bit Linux OS. >

Re: [OMPI users] Implementing a new BTL module in MCA

2010-08-03 Thread Nysal Jan
You can find the template for a BTL in ompi/mca/btl/template (You will find this on the subversion trunk). Copy and rename the folder/files. Use this as a starting point. For details on creating a new component (such as a new BTL) look here - https://svn.open-mpi.org/trac/ompi/wiki/devel/CreateComp

Re: [OMPI users] OpenMPI providing rank?

2010-07-28 Thread Nysal Jan
OMPI_COMM_WORLD_RANK can be used to get the MPI rank. For other environment variables - http://www.open-mpi.org/faq/?category=running#mpi-environmental-variables For processor affinity see this FAQ entry - http://www.open-mpi.org/faq/?category=all#using-paffinity --Nysal On Wed, Jul 28, 2010 at 9

Re: [OMPI users] Problem with compilation : statically linked applications

2010-06-14 Thread Nysal Jan
__cxa_get_exception_ptr should be defined in libstdc++ shared library. --Nysal On Mon, Jun 14, 2010 at 5:51 AM, HeeJin Kim wrote: > Dear all, > > I had built openmpi-1.4.2 with: > configure CC=icc CXX=icpc F77=ifort FC=ifort > --prefix=/home/biduri/program/openmpi --enable-mpi-threads --enable-

Re: [OMPI users] Buffer size limit and memory consumption problem on heterogeneous (32 bit / 64 bit) machines

2010-05-20 Thread Nysal Jan
This probably got fixed in https://svn.open-mpi.org/trac/ompi/ticket/2386 Can you try 1.4.2, the fix should be in there. Regards --Nysal On Thu, May 20, 2010 at 2:02 PM, Olivier Riff wrote: > Hello, > > I assume this question has been already discussed many times, but I can not > find on Intern

Re: [OMPI users] libnuma issue

2009-04-15 Thread Nysal Jan
You could try statically linking the Intel-provided libraries. Use LDFLAGS=-static-intel --Nysal On Wed, 2009-04-15 at 21:03 +0200, Francesco Pietra wrote: > On Wed, Apr 15, 2009 at 8:39 PM, Prentice Bisbal wrote: > > Francesco Pietra wrote: > >> I used --with-libnuma=/usr since Prentice Bisbal

Re: [OMPI users] XLF and 1.3.1

2009-04-14 Thread Nysal Jan
Can you try adding --disable-dlopen to the configure command line --Nysal On Tue, 2009-04-14 at 10:19 +0200, Jean-Michel Beuken wrote: > Hello, > > I'm trying to build 1.3.1 under IBM Power5 + SLES 9.1 + XLF 9.1... > > after some searches on FAQ and Google, my configure : > > export CC="/opt/

Re: [OMPI users] selected pml cm, but peer [[2469, 1], 0] on compute-0-0 selected pml ob1

2009-03-19 Thread Nysal Jan
fs1 is selecting the "cm" PML whereas other nodes are selecting the "ob1" PML component. You can force ob1 to be used via "--mca pml ob1" What kind of hardware/NIC does fs1 have? --Nysal On Wed, 2009-03-18 at 17:17 -0400, Gary Draving wrote: > Hi all, > > anyone ever seen an error like this? Se

Re: [OMPI users] Problems in 1.3 loading shared libs when usingVampirServer

2009-02-25 Thread Nysal Jan
On Tue, 2009-02-24 at 13:30 -0500, Jeff Squyres wrote: > - Get Python to give you the possibility of opening dependent > libraries in the global scope. This may be somewhat controversial; > there are good reasons to open plugins in private scopes. But I have > to imagine that OMPI is not th

Re: [OMPI users] lammps MD code fails with Open MPI 1.3

2009-02-20 Thread Nysal Jan
It could be the same bug reported here http://www.open-mpi.org/community/lists/users/2009/02/8010.php Can you try a recent snapshot of 1.3.1 (http://www.open-mpi.org/nightly/v1.3/) to verify if this has been fixed --Nysal On Thu, 2009-02-19 at 16:09 -0600, Jeff Pummill wrote: > I built a fresh v

Re: [OMPI users] Problem with AlltoAll routine

2008-05-17 Thread Nysal Jan
Gabriele, Can you try with Open MPI 1.2.6. It has a parameter to disable early completion, set it to zero (-mca pml_ob1_use_early_completion 0). --Nysal On Wed, May 7, 2008 at 9:29 PM, Gabriele FATIGATI wrote: > I have attached informations requested about Infiniband net and OpenMPi > enviromen