Re: [OMPI users] "undefined reference to `MPI_Comm_create_group'" error message when using Open MPI 1.6.2

2017-06-09 Thread r...@open-mpi.org
en-mpi.org" <r...@open-mpi.org> > To: Arham Amouie <erham...@yahoo.com>; Open MPI Users > <users@lists.open-mpi.org> > Sent: Friday, June 9, 2017 5:40 PM > Subject: Re: [OMPI users] "undefined reference to `MPI_Comm_create_group'" > error messag

Re: [OMPI users] "undefined reference to `MPI_Comm_create_group'" error message when using Open MPI 1.6.2

2017-06-09 Thread Arham Amouie via users
g" <r...@open-mpi.org> To: Arham Amouie <erham...@yahoo.com>; Open MPI Users <users@lists.open-mpi.org> Sent: Friday, June 9, 2017 5:40 PM Subject: Re: [OMPI users] "undefined reference to `MPI_Comm_create_group'" error message when using Open MPI 1.6.2 Sur

Re: [OMPI users] "undefined reference to `MPI_Comm_create_group'" error message when using Open MPI 1.6.2

2017-06-09 Thread r...@open-mpi.org
.@gmail.com> > To: Arham Amouie <erham...@yahoo.com>; Open MPI Users > <users@lists.open-mpi.org> > Sent: Thursday, June 8, 2017 2:41 PM > Subject: Re: [OMPI users] "undefined reference to `MPI_Comm_create_group'" > error message when using Open MPI 1.6.2

Re: [OMPI users] "undefined reference to `MPI_Comm_create_group'" error message when using Open MPI 1.6.2

2017-06-09 Thread Arham Amouie via users
in advance, Arham From: Gilles Gouaillardet <gilles.gouaillar...@gmail.com> To: Arham Amouie <erham...@yahoo.com>; Open MPI Users <users@lists.open-mpi.org> Sent: Thursday, June 8, 2017 2:41 PM Subject: Re: [OMPI users] "undefined reference to `MPI_Comm_create_grou

Re: [OMPI users] "undefined reference to `MPI_Comm_create_group'" error message when using Open MPI 1.6.2

2017-06-08 Thread Jeff Hammond
"I can't upgrade Open MPI on the computing nodes of this system" is false. Open-MPI can be installed entirely in userspace in your home directory. If you read the MPI_Comm_create_group paper, there should be instructions on how to implement this using MPI-2 features. Jim Dinan wrote a working

Re: [OMPI users] "undefined reference to `MPI_Comm_create_group'" error message when using Open MPI 1.6.2

2017-06-08 Thread Nathan Hjelm
MPI_Comm_create_groups is an MPI-3.0+ function. 1.6.x is MPI-2.1. You can use the macros MPI_VERSION and MPI_SUBVERSION to check the MPI version. You will have to modify your code if you want it to work with older versions of Open MPI. -Nathan On Jun 08, 2017, at 03:59 AM, Arham Amouie via

Re: [OMPI users] "undefined reference to `MPI_Comm_create_group'" error message when using Open MPI 1.6.2

2017-06-08 Thread Gilles Gouaillardet
MPI_Comm_create_group was not available in Open MPI v1.6. so unless you are willing to create your own subroutine in your application, you'd rather upgrade to Open MPI v2 i recomment you configure Open MPI with --disable-dlopen --prefix= unless you plan to scale on thousands of nodes, you should

[OMPI users] "undefined reference to `MPI_Comm_create_group'" error message when using Open MPI 1.6.2

2017-06-08 Thread Arham Amouie via users
Hello. Open MPI 1.6.2 is installed on the cluster I'm using. At the moment I can't upgrade Open MPI on the computing nodes of this system. My C code contains many calls to MPI functions. When I try to 'make' this code on the cluster, the only error that I get is "undefined reference to