Re: [OMPI users] Problems in compiling a code with dynamic linking

2016-03-25 Thread Elio Physics
. From: users on behalf of Gus Correa Sent: Thursday, March 24, 2016 4:33 PM To: Open MPI Users Subject: Re: [OMPI users] Problems in compiling a code with dynamic linking Hi Elie Besides Gilles' and Thomas' suggestions: 1) Do you have any file system in yo

Re: [OMPI users] Problems in compiling a code with dynamic linking

2016-03-24 Thread Gus Correa
intel/mkl/bin/mklvars.sh although the link is true! Any advice please? Thanks *From:* users on behalf of Gilles Gouaillardet *Sent:* Thursday, March 24, 2016 12:22 AM *To:* Open MPI Users *Subject:* Re: [OMPI users] Prob

Re: [OMPI users] Problems in compiling a code with dynamic linking

2016-03-24 Thread Tim Prince
On 3/24/2016 12:01 AM, Gilles Gouaillardet wrote: > Elio, > > usually, /opt is a local filesystem, so it is possible /opt/intel is > only available on your login nodes. > > your best option is to ask your sysadmin where the mkl libs are on the > compute nodes, and/or how to use mkl in your jobs.

Re: [OMPI users] Problems in compiling a code with dynamic linking

2016-03-24 Thread Thomas Jahns
Hello, On 03/24/2016 03:22 AM, Gilles Gouaillardet wrote: it seems /opt/intel/composer_xe_2013_sp1/bin/compilervars.sh is only available on your login/frontend nodes, but not on your compute nodes. you might be luckier with /opt/intel/mkl/bin/mklvars.sh an other option is to ldd /home/emoujaes/

Re: [OMPI users] Problems in compiling a code with dynamic linking

2016-03-24 Thread Gilles Gouaillardet
:22 AM *To:* Open MPI Users *Subject:* Re: [OMPI users] Problems in compiling a code with dynamic linking Elio, it seems /opt/intel/composer_xe_2013_sp1/bin/compilervars.sh is only available on your login/frontend nodes, but not on your compute nodes. you might be luckier with /opt/intel/mkl/bin/

Re: [OMPI users] Problems in compiling a code with dynamic linking

2016-03-23 Thread Elio Physics
Any advice please? Thanks From: users on behalf of Gilles Gouaillardet Sent: Thursday, March 24, 2016 12:22 AM To: Open MPI Users Subject: Re: [OMPI users] Problems in compiling a code with dynamic linking Elio, it seems /opt/intel/composer_xe_20

Re: [OMPI users] Problems in compiling a code with dynamic linking

2016-03-23 Thread Gilles Gouaillardet
Elio, it seems /opt/intel/composer_xe_2013_sp1/bin/compilervars.sh is only available on your login/frontend nodes, but not on your compute nodes. you might be luckier with /opt/intel/mkl/bin/mklvars.sh an other option is to ldd /home/emoujaes/Elie/SPRKKR/bin/kkrscf6.3MPI on your login node, an

[OMPI users] Problems in compiling a code with dynamic linking

2016-03-23 Thread Elio Physics
Dear all, I have been trying ,for the last week, compiling a code (SPRKKR). the compilation went through ok. however, there are problems with the executable (kkrscf6.3MPI) not finding the MKL library links. i could not fix the problem..I have tried several things but in vain..I will post both