Re: [OMPI users] mpirun gives error when option '--hostfiles' or '--hosts' is used

2016-05-04 Thread jody
Actually all machines use iptables as firewall. I compared the rules triops and kraken use and found that triops had the line REJECT all -- anywhere anywhere reject-with icmp-host-prohibited which kraken did not have (otherwise they were identical). I removed that l

Re: [OMPI users] mpirun gives error when option '--hostfiles' or '--hosts' is used

2016-05-03 Thread Jeff Squyres (jsquyres)
Have you disabled firewalls between these machines? > On May 3, 2016, at 11:26 AM, jody wrote: > > ...my bad! > > I had set up things so that PATH and LD_LIBRARY_PATH were correct in > interactive mode, > but they were wrong ssh was called non-interactively. > > Now i have a new problem: > Wh

Re: [OMPI users] mpirun gives error when option '--hostfiles' or '--hosts' is used

2016-05-03 Thread jody
...my bad! I had set up things so that PATH and LD_LIBRARY_PATH were correct in interactive mode, but they were wrong ssh was called non-interactively. Now i have a new problem: When i do mpirun -np 6 --hostfile krakenhosts hostname from triops, sometimes it seems to hang (i.e. no output, doesn

Re: [OMPI users] mpirun gives error when option '--hostfiles' or '--hosts' is used

2016-05-03 Thread Jeff Squyres (jsquyres)
Have you verified that you are running the same version of Open MPI on both servers when launched from non-interactive logins? This kind of error is somewhat typical if you accidentally mixed, for example, Open MPI v1.6.x and v1.10.2 (i.e., v1.10.2 understands the --hnp-topo-sig back end option

[OMPI users] mpirun gives error when option '--hostfiles' or '--hosts' is used

2016-05-03 Thread jody
Hi I have installed Open MPI v 1.10.2 on two machines today using only the prefix-option for configure, and then doing 'make all install'. On both machines i changed .bashrc to set PATH and LD_LIBRARY_PATH correctly. (I checked by running 'mpirun --version' and verifying that the output does indee