Re: [OMPI users] libnuma.so error

2023-07-20 Thread Gus Correa via users
Hi Luis That's awkward, because if the numa/libnuma packages were properly installed, the softlink should have been created. Maybe check with "yum list |grep numa", then if something is missing use "yum installl ...". [Anyway, maybe the compute nodes use a different mechanism to pull their system

Re: [OMPI users] libnuma.so error

2023-07-20 Thread Luis Cebamanos via users
Hi Gus, Yeap, I can see softlink is missing on the compute nodes. Thanks! Luis On 19/07/2023 17:42, Gus Correa via users wrote: If it is installed, libunuma should be in: /usr/lib64/libnuma.so as a softlink to the actual number-versioned  library. In general the loader is configured to search

Re: [OMPI users] libnuma.so error

2023-07-19 Thread Gus Correa via users
If it is installed, libunuma should be in: /usr/lib64/libnuma.so as a softlink to the actual number-versioned library. In general the loader is configured to search for shared libraries in /usr/lib64 ("ldd " may shed some light here). You can check if the numa packages are installed with: yum lis

Re: [OMPI users] libnuma.so error

2023-07-19 Thread Jeff Squyres (jsquyres) via users
It's not clear if that message is being emitted by Open MPI. It does say it's falling back to a different behavior if libnuma.so is not found, so it appears if it's treating it as a warning, not an error. From: users on behalf of Luis Cebamanos via users Sent:

Re: [OMPI users] libnuma.so error

2023-07-19 Thread Gilles Gouaillardet via users
Luis, That can happen if a component is linked with libnuma.so: Open MPI will fail to open it and try to fallback on an other one. You can run ldd on the mca_*.so components in the /.../lib/openmpi directory to figure out which is using libnuma.so and assess if it is needed or not. Cheers, Gil