[OMPI users] Error in openmpi-1.8.2a1r31556 with Sun C 5.12

2014-04-30 Thread Siegmar Gross
Hi, I tried to install openmpi-1.8.2a1r31556 on my machines (openSUSE Linux 12.1 x86_64, Solaris 10 x86_64, and Solaris 10 Sparc) with "Sun C 5.12" and got the following error on all platforms. tyr openmpi-1.8.2a1r31556-Linux.x86_64.64_cc 131 tail -15 log.make.Linux.x86_64.64_cc PPFC comm_

[OMPI users] Error in openmpi-1.9a1r31561 using gcc or cc

2014-04-30 Thread Siegmar Gross
Hi, I tried to install openmpi-1.9a1r31561 on my machines (openSUSE Linux 12.1 x86_64, Solaris 10 x86_64, and Solaris 10 Sparc) with "Sun C 5.12" and gcc-4.9.0. I got the following error on all platforms using gcc. tyr openmpi-1.9a1r31561-Linux.x86_64.64_gcc 146 tail -15 log.make.Linux.x86_64.6

[OMPI users] unknown interface on openmpi-1.9a1r31750

2014-05-14 Thread Siegmar Gross
Hi, I just installed openmpi-1.9a1r31750 on my machines (Solaris 10 Sparc, Solaris 10 x86_64, and openSUSE Linux 12.1 x86_64) with Sun C5.12 and still have the following problem. tyr fd1026 102 which mpiexec /usr/local/openmpi-1.9_64_cc/bin/mpiexec tyr fd1026 103 mpiexec -np 3 --host tyr,sunpc1,l

[OMPI users] unknown interface on openmpi-1.8.2a1r31742

2014-05-14 Thread Siegmar Gross
Hi, I just installed openmpi-1.8.2a1r31742 on my machines (Solaris 10 Sparc, Solaris 10 x86_64, and openSUSE Linux 12.1 x86_64) with Sun C5.12 and still have the following problem. tyr fd1026 102 which mpiexec /usr/local/openmpi-1.8.2_64_cc/bin/mpiexec tyr fd1026 103 mpiexec -np 3 --host tyr,sunp

Re: [OMPI users] unknown interface on openmpi-1.8.2a1r31742

2014-05-14 Thread Siegmar Gross
tes:329323 (321.6 Kb) tyr fd1026 114 Do you need something else? Kind regards Siegmar > On May 14, 2014, at 7:45 AM, Siegmar Gross > wrote: > > > Hi, > > > > I just installed openmpi-1.8.2a1r31742 on my machines (Solaris 10 > > Sparc, Solaris 10 x86_64,

Re: [OMPI users] unknown interface on openmpi-1.8.2a1r31742

2014-05-14 Thread Siegmar Gross
tik.hs-fulda.de:06877] mca: base: close: unloading component tcp tyr fd1026 106 Thank you very much for your help in advance. Do you need anything else? Kind regards Siegmar > On May 14, 2014, at 9:06 AM, Siegmar Gross > wrote: > > > Hi Ralph, > > > >> What

Re: [OMPI users] unknown interface on openmpi-1.8.2a1r31742

2014-05-15 Thread Siegmar Gross
Current function is find_dyn_components 393 if (0 != lt_dlforeachfile(dir, save_filename, NULL)) { (dbx) Do you need anything else? KInd regards Siegmar On May 14, 2014, at 11:44 AM, Siegmar Gross wrote: > > > Hi Ralph, > > > >> Hmmm...wel

Re: [OMPI users] unknown interface on openmpi-1.8.2a1r31742

2014-05-16 Thread Siegmar Gross
Hi, > This bug should be fixed in tonight's tarball, BTW. ... > > It is an unrelated bug introduced by a different commit - > > causing mpirun to segfault upon termination. The fact that > > you got the hostname to run indicates that this original > > fix works, so at least we know the connection

Re: [OMPI users] Program abortion at a simple MPI_Get Programm

2014-06-19 Thread Siegmar Gross
Hi, > I wrote a litte MPI program to demonstrate the mpi_get() function > (see attachment). > > The idea behind the program is that a master process with rank 0 > fills an integer array with the size of MPI_Comm_size with values. > The other processes should MPI_GET the value from this shared int

[OMPI users] problem with openmpi-1.8.2rc2r32288 on Solaris 10 Sparc

2014-07-23 Thread Siegmar Gross
Hi, today I installed openmpi-1.8.2rc2r32288 on my machines (Solaris 10 Sparc, Solaris 10 x86_64, and openSUSE Linux 12.1 x86_64) with Sun C 5.12 and gcc-4.9.0. Unfortunately I have problems with both compilers on "Solaris 10 Sparc". My small program works as expected on "Solaris 10 x86_64" and Li

[OMPI users] problem with openmpi-1.8.2rc2 on Solaris 10 Sparc

2014-07-24 Thread Siegmar Gross
Hi, today I installed openmpi-1.8.2rc2 on my machines (Solaris 10 Sparc, Solaris 10 x86_64, and openSUSE Linux 12.1 x86_64) with Sun C 5.12 and gcc-4.9.0. I still have the same problems which I reported yesterday for openmpi-1.8.2rc2r32288. tyr hello_1 111 ompi_info | grep MPI: O

[OMPI users] problem with mca_pml_ob1.so in openmpi-1.8.2rc2

2014-07-25 Thread Siegmar Gross
Hi, today I tried to track down the error which I reported for my small program (running on Solaris 10 Sparc). tyr hello_1 121 mpiexec -np 2 a.out Process 1 of 2 running on tyr.informatik.hs-fulda.de Process 0 of 2 running on tyr.informatik.hs-fulda.de Now 1 slave tasks are sending greetings. ld

[OMPI users] bus error with openmpi-1.8.2rc2 on Solaris 10 Sparc

2014-07-25 Thread Siegmar Gross
Hi, I have installed openmpi-1.8.2rc2 with gcc-4.9.0 on Solaris 10 Sparc and I receive a bus error, if I run a small program. tyr hello_1 105 mpiexec -np 2 a.out [tyr:29164] *** Process received signal *** [tyr:29164] Signal: Bus Error (10) [tyr:29164] Signal code: Invalid address alignment (1)

[OMPI users] SIGSEGV for Java program in openmpi-1.8.2rc2 on Solaris 10

2014-07-25 Thread Siegmar Gross
Hi, I have installed openmpi-1.8.2rc2 with Sun c 5.12 on Solaris 10 Sparc and x86_64 and I receive a segmentation fault, if I run a small Java program. rs0 java 105 mpiexec -np 1 java InitFinalizeMain # # A fatal error has been detected by the Java Runtime Environment: # # SIGSEGV (0xb) at pc=0x

[OMPI users] missing link option for openmpi-1.8.2rc2 on Linux

2014-07-25 Thread Siegmar Gross
Hi, I installed openmpi-1.8.2rc2 on "openSUSE Linux 12.1 x86_64" with Sun C 5.12 and get the following warning if I run a small Java program. I get no warning for my gcc-4.9.0 version of openmpi-1.8.2rc2. linpc1 java 109 mpiexec -np 1 java InitFinalizeMain Java HotSpot(TM) 64-Bit Server VM warni

Re: [OMPI users] SIGSEGV for Java program in openmpi-1.8.2rc2 onSolaris 10

2014-07-25 Thread Siegmar Gross
sco.com>> wrote: > > > > That's quite odd that it only happens for Java programs -- it > > should happen for *all* programs, based on the stack trace you've > > shown. > > > > Can you print the value of the lds struct where th

Re: [OMPI users] problem with mca_pml_ob1.so in openmpi-1.8.2rc2

2014-07-25 Thread Siegmar Gross
Hi, > Can you try adding the > > #include > > to pml_ob1_isend.c > > And see if that resolves the issue? Unfortunately it doesn't resolve the problem. I still get the same error messages. Kind regards Siegmar > > -Nathan > > On Fri, Jul 25, 2

[OMPI users] problem with rankfile in openmpi-1.8.2rc3

2014-08-05 Thread Siegmar Gross
Hi, yesterday I installed openmpi-1.8.2rc3 on my machines (Solaris 10 Sparc, Solaris 10 x86_64, and openSUSE Linux 12.1 x86_64) with Sun C 5.12. I get an error, if I use a rankfile for all three architectures. The error message depends on the local machine, which I use to run "mpiexec". I get a di

Re: [OMPI users] SIGSEGV for Java program in openmpi-1.8.2rc2 onSolaris 10

2014-08-05 Thread Siegmar Gross
e_append lds->lds_want_file_append = 0 (dbx) print lds->lds_file_suffix lds->lds_file_suffix = (nil) (dbx) Is the above information helpful to track down the error? Do you need anything else? Thank you very much for any help in advance. Kind regards Siegmar > On Jul 25, 2014

Re: [OMPI users] bus error with openmpi-1.8.2rc2 on Solaris 10 Sparc

2014-08-05 Thread Siegmar Gross
:13 (gdb) Is the above information helpful to track down the error? Do you need anything else? Thank you very much for any help in advance. Kind regards Siegmar > On Jul 25, 2014, at 2:08 AM, Siegmar Gross > wrote: > > > Hi, > > > > I have installed openmpi-1.

Re: [OMPI users] bus error with openmpi-1.8.2rc2 on Solaris 10 Sparc

2014-08-07 Thread Siegmar Gross
reads=posix \ --with-hwloc=internal \ --without-verbs \ --with-wrapper-cflags="-std=c11 -m64" \ --enable-debug \ |& tee log.configure.$SYSTEM_ENV.$MACHINE_ENV.64_gcc > If so, you should get a line number in the backtrace I got them for gdb (see below), but not for "

Re: [OMPI users] problem with rankfile in openmpi-1.8.2rc3

2014-08-07 Thread Siegmar Gross
Aug 5, 2014, at 12:56 AM, Siegmar Gross wrote: > > > Hi, > > > > yesterday I installed openmpi-1.8.2rc3 on my machines > > (Solaris 10 Sparc, Solaris 10 x86_64, and openSUSE > > Linux 12.1 x86_64) with Sun C 5.12. I get an error, > > if I use a rankfile f

Re: [OMPI users] problem with rankfile in openmpi-1.8.2rc3

2014-08-07 Thread Siegmar Gross
eturned "Error" for bitmap "2" Location: ../../../../../openmpi-1.8.2rc3/orte/mca/odls/default/odls_default_module.c:551 -- sunpc1 openmpi_1.7.x_or_newer 106 Kind regards Siegmar > On

[OMPI users] bus error with openmpi-1.8.2rc4r32485 and gcc-4.9.0

2014-08-11 Thread Siegmar Gross
Hi, thank you very much to everybody who tried to solve my bus error problem on Solaris 10 Sparc. I thought that you found and fixed it, so that I installed openmpi-1.8.2rc4r32485 on my machines (Solaris 10 Sparc (tyr), Solaris 10 x86_64 (sunpc1), openSUSE Linux 12.1 x86_64 (linpc1)) with gcc-4.9.

[OMPI users] SIGSEV with openmpi-1.8.2rc4r32485 on Solaris for Sun C and Java

2014-08-11 Thread Siegmar Gross
Hi, yesterday I installed openmpi-1.8.2rc4r32485 on my machines (Solaris 10 Sparc (tyr), Solaris 10 x86_64 (sunpc1), openSUSE Linux 12.1 x86_64 (linpc1)) with Sun C 5.12. A small Java program breaks with SIGSEV on my Solaris systems. tyr java 118 ssh linpc1 linpc1 fd1026 101 mpiexec -np 1 java I

[OMPI users] update to problem with rankfiles

2014-08-11 Thread Siegmar Gross
Hi, yesterday I installed openmpi-1.8.2rc4r32485 on my machines (Solaris 10 Sparc (tyr), Solaris 10 x86_64 (sunpc0, sunpc1), openSUSE Linux 12.1 x86_64 (linpc0, linpc1)) with Sun C 5.12. Today I was playing around a little bit more with rankfiles and found the following things which may be helpful

[OMPI users] bus error with openmpi-1.8.2 and gcc-4.9.0

2014-09-02 Thread Siegmar Gross
Hi, yesterday I installed openmpi-1.8.2 on my machines (Solaris 10 Sparc (tyr), Solaris 10 x86_64 (sunpc0), and openSUSE Linux 12.1 x86_64 (linpc0)) with gcc-4.9.0. A small program works on some machines, but breaks with a bus error on Solaris 10 Sparc. tyr small_prog 118 which mpicc /usr/local/

[OMPI users] SIGSEGV with Java, openmpi-1.8.2, and Sun C and gcc-4.9.0

2014-09-02 Thread Siegmar Gross
Hi, yesterday I installed openmpi-1.8.2 on my machines (Solaris 10 Sparc (tyr), Solaris 10 x86_64 (sunpc0), and openSUSE Linux 12.1 x86_64 (linpc0)) with Sun C 5.12. A small Java program works on Linux, but breaks with a segmentation fault on Solaris 10. tyr java 172 where mpijavac mpijavac is a

Re: [OMPI users] bus error with openmpi-1.8.2 and gcc-4.9.0

2014-09-02 Thread Siegmar Gross
Hi Takahiro, > I forgot to follow the previous report, sorry. > The patch I suggested is not included in Open MPI 1.8.2. > The backtrace Siegmar reported points the problem that I fixed > in the patch. > > http://www.open-mpi.org/community/lists/users/2014/08/24968.php > > Siegmar: > Could you

[OMPI users] Java problem with openmpi-1.8.3a1r32641

2014-09-02 Thread Siegmar Gross
Hi, yesterday I installed openmpi-1.8.3a1r32641 on my machines (Solaris 10 Sparc (tyr), Solaris 10 x86_64 (sunpc0), and openSUSE Linux 12.1 x86_64 (linpc0)) with Sun C 5.12 and gcc-4.9.0. A small Java program breaks with SIGSEGV. gdb shows the following backtrace for the Sun C version. tyr java

[OMPI users] problems and bus error with openmpi-1.9a1r32657

2014-09-02 Thread Siegmar Gross
Hi, yesterday I installed openmpi-1.9a1r32657 on my machines (Solaris 10 Sparc (tyr), Solaris 10 x86_64 (sunpc0), and openSUSE Linux 12.1 x86_64 (linpc0)) with Sun C 5.12 and gcc-4.9.0. I have the following problems with my Sun C version. First my problem with Java and below my problem with C.

[OMPI users] same problems and bus error with openmpi-1.9a1r32657 and gcc

2014-09-02 Thread Siegmar Gross
Hi, yesterday I installed openmpi-1.9a1r32657 on my machines (Solaris 10 Sparc (tyr), Solaris 10 x86_64 (sunpc0), and openSUSE Linux 12.1 x86_64 (linpc0)) with Sun C 5.12 and gcc-4.9.0. I have the following problems with my gcc version. First once more my problems with Java and below my problems

[OMPI users] shmem.jar not available for Solaris

2014-09-03 Thread Siegmar Gross
Hi, today I installed openmpi-1.9a1r32664 on my machines with Sun C 5.12 and gcc-4.9.0. Unfortunately shmem.jar isn't available on my Solaris machines. tyr java 112 mpijavac InitFinalizeMain.java warning: [path] bad path element "/usr/local/openmpi-1.9_64_cc/lib64/shmem.jar": no such file or di

Re: [OMPI users] SIGSEGV with Java, openmpi-1.8.2, and Sun C and gcc-4.9.0

2014-09-03 Thread Siegmar Gross
a1r32664/orte/tools/orterun/main.c:13 (gdb) Kind regards Siegmar > On Sep 2, 2014, at 4:21 AM, Siegmar Gross wrote: > > > Hi, > > > > yesterday I installed openmpi-1.8.2 on my machines (Solaris 10 Sparc > > (tyr), Solaris 10 x86_64 (sunpc0), and openSUSE Li

[OMPI users] internal-failure in openmpi-1.9a1r32664 on Linux with Sun C

2014-09-03 Thread Siegmar Gross
Hi, today I installed openmpi-1.9a1r32664 on my machines (Solaris 10 Sparc (tyr), Solaris 10 x86_64 (sunpc1), and openSUSE Linux 12.1 x86_64 (linpc1)) with Sun C 5.12 and gcc-4.9.0. I get the following internal failure for my Sun C version on Linux. linpc1 small_prog 112 ompi_info | grep MPI:

[OMPI users] interrupted system call in openmpi-1.9a1r32664 on Soalris x86_64

2014-09-03 Thread Siegmar Gross
Hi, today I installed openmpi-1.9a1r32664 on my machines (Solaris 10 Sparc (tyr), Solaris 10 x86_64 (sunpc1), and openSUSE Linux 12.1 x86_64 (linpc1)) with Sun C 5.12 and gcc-4.9.0. I get the following error for my Sun C version on Solaris x86_64. sunpc1 small_prog 110 ompi_info | grep MPI:

[OMPI users] bus error in openmpi-1.9a1r32664 on Solaris Sparc

2014-09-03 Thread Siegmar Gross
Hi, today I installed openmpi-1.9a1r32664 on my machines (Solaris 10 Sparc (tyr), Solaris 10 x86_64 (sunpc1), and openSUSE Linux 12.1 x86_64 (linpc1)) with Sun C 5.12 and gcc-4.9.0. I get the following error for my Sun C version on Solaris Sparc. tyr small_prog 129 ompi_info | grep MPI:

[OMPI users] broken pipe in openmpi-1.9a1r32664 on Solaris Sparc

2014-09-03 Thread Siegmar Gross
Hi, today I installed openmpi-1.9a1r32664 on my machines (Solaris 10 Sparc (tyr), Solaris 10 x86_64 (sunpc1), and openSUSE Linux 12.1 x86_64 (linpc1)) with Sun C 5.12 and gcc-4.9.0. I get the following error for my Sun C version on Solaris Sparc. tyr small_prog 129 ompi_info | grep MPI:

[OMPI users] internal-failure with gcc-4.9.0 in openmpi-1.9a1r32664 on Linux

2014-09-03 Thread Siegmar Gross
Hi, today I installed openmpi-1.9a1r32664 on my machines (Solaris 10 Sparc (tyr), Solaris 10 x86_64 (sunpc1), and openSUSE Linux 12.1 x86_64 (linpc1)) with Sun C 5.12 and gcc-4.9.0. I get the following internal failure for my gcc.4.9.0-version on Linux. I also have the other errors which I alrea

[OMPI users] bus error in openmpi-1.9a1r32669 on Solaris 10 Sparc

2014-09-05 Thread Siegmar Gross
Hi, today I installed openmpi-1.9a1r32669 on my machines (Solaris 10 Sparc (tyr), Solaris 10 x86_64 (sunpc1), and openSUSE Linux 12.1 x86_64 (linpc1)) with Sun C 5.12 and gcc-4.9.0. I get the following bus error for my Sun C version on Solaris Sparc. tyr small_prog 125 ompi_info | grep -e MPI: -

[OMPI users] segmentation fault for Java in openmpi-1.9a1r32669 on Solaris 10 Sparc

2014-09-05 Thread Siegmar Gross
Hi, today I installed openmpi-1.9a1r32669 on my machines (Solaris 10 Sparc (tyr), Solaris 10 x86_64 (sunpc1), and openSUSE Linux 12.1 x86_64 (linpc1)) with Sun C 5.12 and gcc-4.9.0. I get the following segmentation fault for my Sun C version on Solaris Sparc for Java programs. tyr java 137 ompi_

[OMPI users] still SIGSEGV for Java and openmpi-1.8.3a1r32692 on Solaris

2014-09-10 Thread Siegmar Gross
Hi, today I installed openmpi-1.8.3a1r32692 on my machines (Solaris 10 Sparc (tyr), Solaris 10 x86_64 (sunpc1), and openSUSE Linux 12.1 x86_64 (linpc1)) with Sun C 5.12 and gcc-4.9.0. I still get a segmentation fault for my small Java program on Solaris. tyr java 102 ompi_info | grep -e MPI: -e

Re: [OMPI users] unaligned accesses

2014-09-12 Thread Siegmar Gross
Hi Jeff, > We committed some fixes -- see if you can get farther with > tonight's nightly tarball. My small Java and C programs still break on Solaris 10 Sparc and x86_64 and on Linux (Sun C 5.12) with different errors. I have put everything into this email, because I have already sent single err

[OMPI users] more info on SIGSEGV for Java and openmpi-1.9a1r32716 on Solaris

2014-09-12 Thread Siegmar Gross
Hi, is the following info helpful? tyr java 160 /usr/local/gdb-7.6.1_64_gcc/bin/gdb mpiexec GNU gdb (GDB) 7.6.1 Copyright (C) 2013 Free Software Foundation, Inc. License GPLv3+: GNU GPL version 3 or later This is free software: you are free to change and redistr

[OMPI users] still SIGSEGV with Java in openmpi-1.9a1r32738 on Solaris

2014-09-16 Thread Siegmar Gross
Hi, I still have a problem with mpijava on Solaris. tyr java 107 ompi_info | grep -e MPI: -e "C compiler:" Open MPI: 1.9a1r32738 C compiler: cc tyr java 108 mpijavac InitFinalizeMain.java warning: [path] bad path element "/usr/local/openmpi-1.9_64_cc/lib64/shmem.ja

[OMPI users] still SIGSEGV for Java in openmpi-1.9a1r32807 on Solaris

2014-09-30 Thread Siegmar Gross
Hi, yesterday I installed openmpi-1.9a1r32807 on my machines with Sun C 5.12 and gcc-4.9.1. Unfortunately my small Java program still breaks with a segmentation fault. tyr java 109 ompi_info | grep -e MPI: Open MPI: 1.9a1r32807 tyr java 110 mpijavac InitFinalizeMain.java warning:

[OMPI users] still SIGSEGV with Java in openmpi-1.9.0a1git99c3999 on Solaris

2014-10-05 Thread Siegmar Gross
Hi, I have installed openmpi-1.9.0a1git99c3999 on my machines with Sun C 5.12 and gcc-4.9.1 and I still get SIGSEGV for my small Java program. Furthermore I get "select: Interrupted system call" as you can see below. I use Java-1.8.0. The error appears on Solaris 10 Sparc and Solaris 10 x86_64. t

[OMPI users] which info is needed for SIGSEGV in Java for openmpi-dev-124-g91e9686 on Solaris

2014-10-21 Thread Siegmar Gross
Hi, I installed openmpi-dev-124-g91e9686 on Solaris 10 Sparc with gcc-4.9.1 to track down the error with my small Java program. I started single stepping in orterun.c at line 1081 and continued until I got the segmentation fault. I get "jdata = 0x0" in version openmpi-1.8.2a1r31804, which is the l

Re: [OMPI users] which info is needed for SIGSEGV in Java for openmpi-dev-124-g91e9686 on Solaris

2014-10-22 Thread Siegmar Gross
Hi Takahiro, > mpiexec and java run as distinct processes. Your JRE message > says java process raises SEGV. So you should trace the java > process, not the mpiexec process. And more, your JRE message > says the crash happened outside the Java Virtual Machine in > native code. So usual Java progra

Re: [OMPI users] which info is needed for SIGSEGV in Java foropenmpi-dev-124-g91e9686 on Solaris

2014-10-23 Thread Siegmar Gross
Hello Oscar, do you have time to look into my problem? Probably Takahiro has a point and gdb behaves differently on Solaris and Linux, so that the differing outputs have no meaning. I tried to debug my Java program, but without success so far, because I wasn't able to get into the Java program to

Re: [OMPI users] which info is needed for SIGSEGV in Java foropenmpi-dev-124-g91e9686on Solaris

2014-10-24 Thread Siegmar Gross
Hi Gilles, thank you very much for your help. > how did you configure openmpi ? which java version did you use ? > > i just found a regression and you currently have to explicitly add > CFLAGS=-D_REENTRANT CPPFLAGS=-D_REENTRANT > to your configure command line I added "-D_REENTRANT" to my comma

Re: [OMPI users] which info is needed for SIGSEGV in Java for openmpi-dev-124-g91e9686on Solaris

2014-10-25 Thread Siegmar Gross
Hello Gilles and Oscar, unfortunately I didn't get anything useful. It's probably my fault, because I'm still not very familiar with gdb or any other debugger. I did the following things. 1st window: --- tyr java 174 setenv OMPI_ATTACH 1 tyr java 175 mpijavac InitFinalizeMain.java warn

Re: [OMPI users] which info is needed for SIGSEGV in Java foropenmpi-dev-124-g91e9686on Solaris

2014-10-25 Thread Siegmar Gross
Hi Gilles, I changed _dbg to a static variable, so that it is visible in the library, but unfortunately still not in the symbol table. tyr java 419 nm /usr/local/openmpi-1.9.0_64_gcc/lib64/libmpi_java.so | grep -i _dbg [271] | 1249644| 4|OBJT |LOCL |0|18 |_dbg.14258 tyr java 420

Re: [OMPI users] OMPI users] which info is needed for SIGSEGV in Java foropenmpi-dev-124-g91e9686on Solaris

2014-10-26 Thread Siegmar Gross
uot;ompi_config.h" 47 48 #include 49 #ifdef HAVE_TARGETCONDITIONALS_H 50 #include (gdb) Do you have any ideas, what's going wrong or if I must use a different symbol table? Kind regards Siegmar > > Gilles > > > Siegmar Gross wrote: > &

Re: [OMPI users] OMPI users] which info is needed for SIGSEGV inJava foropenmpi-dev-124-g91e9686on Solaris

2014-10-26 Thread Siegmar Gross
ning permissions > and > 34 limitations under the License. > 35 */ > 36 /* > 37 * File : mpi_CartComm.c > 38 * Headerfile : mpi_CartComm.h > 39 * Author : Sung-Hoon Ko, Xinying Li > 40 * Created : Thu Apr 9

Re: [OMPI users] which info is needed for SIGSEGV in Javaforopenmpi-dev-124-g91e9686on Solaris

2014-10-27 Thread Siegmar Gross
Hi Gilles, Oscar, Ralph, Takahiro thank you very much for all your help and time investigating my problems on Sparc systems. > thanks a lot for the detailled explanation. > FWIW, i was previously testing on Solaris 11 that behaves like Linux : > printf("%s", NULL) outputs '(null)' > vs a SIGSEGV

[OMPI users] SIGBUS in openmpi-dev-178-ga16c1e4 on Solaris 10 Sparc

2014-10-28 Thread Siegmar Gross
Hi, today I installed openmpi-dev-178-ga16c1e4 on Solaris 10 Sparc with gcc-4.9.1 and Java 8. Now a very simple Java program works as expected, but other Java programs still break. I removed the warnings about "shmem.jar" and used the following configure command. tyr openmpi-dev-178-ga16c1e4-SunO

Re: [OMPI users] SIGBUS in openmpi-dev-178-ga16c1e4 on Solaris 10 Sparc

2014-10-28 Thread Siegmar Gross
(corrupt stack?) (gdb) Hopefully the above output is helpful. Please let me know if you need something else. Kind regards Siegmar > Siegmar Gross wrote: > >Hi, > > > >today I installed openmpi-dev-178-ga16c1e4 on Solaris 10 Sparc > >with gcc-4.9.1 and Java 8. No

Re: [OMPI users] SIGBUS in openmpi-dev-178-ga16c1e4 on Solaris 10Sparc

2014-10-29 Thread Siegmar Gross
ar > Cheers, > > Gilles > > On 2014/10/29 5:24, Siegmar Gross wrote: > > Hi Gilles, > > > >> From the jvm logs, there is an alignment error in native_get_attr > >> but i could not find it by reading the source code. > >> > >> Could you

[OMPI users] java.lang.ArrayIndexOutOfBoundsException in openmpi-dev-178-ga16c1e4

2014-10-29 Thread Siegmar Gross
Hi, today a tested some small Java programs with openmpi-dev-178-ga16c1e4. One program throws an exception ArrayIndexOutOfBoundsException. The program worked fine in older MPI versions, e.g., openmpi-1.8.2a1r31804. tyr java 138 mpiexec -np 2 java MsgSendRecvMain Now 1 process sends its greeting

[OMPI users] error building openmpi-dev-274-g2177f9e with Sun C 5.12

2014-11-14 Thread Siegmar Gross
Hi, today I tried to install openmpi-dev-274-g2177f9e on my machines (Solaris 10 Sparc, Solaris 10 x86_64, and openSUSE Linux 12.1 x86_64) with Sun C 5.12 and got the following error on all three platforms. tyr openmpi-dev-274-g2177f9e-Linux.x86_64.64_cc 127 tail -13 log.make.Linux.x86_64.64_cc

[OMPI users] error building openmpi-dev-274-g2177f9e with gcc-4.9.2

2014-11-14 Thread Siegmar Gross
Hi, today I tried to install openmpi-dev-274-g2177f9e on my machines (Solaris 10 Sparc, Solaris 10 x86_64, and openSUSE Linux 12.1 x86_64) with gcc-4.9.2 and got the following error on all three platforms. tyr openmpi-dev-274-g2177f9e-Linux.x86_64.64_gcc 117 tail -25 log.make.Linux.x86_64.64_gcc

Re: [OMPI users] error building openmpi-dev-274-g2177f9e withgcc-4.9.2

2014-11-15 Thread Siegmar Gross
my heterogeneous environment. Kind regards and thank you very much once more Siegmar > On Nov 14, 2014, at 12:04 PM, Siegmar Gross > wrote: > > > Hi, > > > > today I tried to install openmpi-dev-274-g2177f9e on my machines > > (Solaris 10 Sparc, Solaris 10 x86_64

[OMPI users] error building openmpi-dev-373-gdee243c with Solaris Studio 12.4

2014-11-29 Thread Siegmar Gross
Hi, today I tried to install openmpi-dev-373-gdee243c on my machines (Solaris 10 Sparc, Solaris 10 x86_64, and openSUSE Linux 12.1 x86_64) with the new Solaris Studio 12.4 compilers and got the following error on all three platforms. tyr openmpi-dev-373-gdee243c-Linux.x86_64.64_cc_sun_c_5.13 135

[OMPI users] error building openmpi-v1.8.3-202-gb568b6e with Solaris Studio 12.4

2014-12-01 Thread Siegmar Gross
Hi, today I tried to install openmpi-v1.8.3-202-gb568b6e on my machines (Solaris 10 Sparc, Solaris 10 x86_64, and openSUSE Linux 12.1 x86_64) with the new Solaris Studio 12.4 compilers and got the same error on all three platforms that I reported Saturday for openmpi-dev-373-gdee243c. linpc1 open

[OMPI users] problems with openmpi-dev-428-g983bd49

2014-12-04 Thread Siegmar Gross
Hi, today I tried to install openmpi-dev-428-g983bd49 on my machines (Solaris 10 Sparc, Solaris 10 x86_64, and openSUSE Linux 12.1 x86_64) with gcc-4.9.2 and the new Solaris Studio 12.4 compilers. I was able to build everything with gcc-4.9.2, but get the following error for "make check" on both S

Re: [OMPI users] problems with openmpi-dev-428-g983bd49

2014-12-05 Thread Siegmar Gross
area recently. > > > On Dec 4, 2014, at 11:15 AM, Jeff Squyres (jsquyres) > wrote: > > > Hi Siegmar -- > > > > Sorry for the delay; your c_funloc issue is definitely on my queue. > Just haven't had a chance to get to it yet. :-( > >

[OMPI users] ERROR: C_FUNLOC function

2014-12-11 Thread Siegmar Gross
Hi Jeff, will you have the time to fix the Fortran problem for the new Oracle Solaris Studio 12.4 compiler suite in openmpi-1.8.4? tyr openmpi-1.8.4rc2-SunOS.sparc.64_cc 103 tail -15 log.make.SunOS.sparc.64_cc PPFC comm_compare_f08.lo PPFC comm_connect_f08.lo PPFC comm_create_e

Re: [OMPI users] ERROR: C_FUNLOC function

2014-12-15 Thread Siegmar Gross
is ? > > > Cheers, > > Gilles > > > On 2014/12/12 2:28, Siegmar Gross wrote: > > Hi Jeff, > > > > will you have the time to fix the Fortran problem for the new Oracle > > Solaris Studio 12.4 compiler suite in openmpi-1.8.4? > > > >

Re: [OMPI users] ERROR: C_FUNLOC function

2014-12-17 Thread Siegmar Gross
557-g01a24c4-SunOS.sparc.64_cc/test' make: *** [check-recursive] Error 1 tyr openmpi-dev-557-g01a24c4-SunOS.sparc.64_cc 136 Kind regards Siegmar > I anticipate that this fix will also make it in for the v1.8.4 > release (see https://github.com/open-mpi/ompi-release/pull/136);

Re: [OMPI users] ERROR: C_FUNLOC function

2014-12-18 Thread Siegmar Gross
Hi Mike, > Could you please check the /etc/mtab file for real FS type for > the following mount points: > > get_mounts: dirs[16]:/misc fs:autofs nfs:No > get_mounts: dirs[17]:/net fs:autofs nfs:No > get_mounts: dirs[18]:/home fs:autofs nfs:No /etc/mtab has the following entries: /etc/auto.misc

[OMPI users] processes hang with openmpi-dev-602-g82c02b4

2014-12-22 Thread Siegmar Gross
Hi, today I installed openmpi-dev-602-g82c02b4 on my machines (Solaris 10 Sparc, Solaris 10 x86_64, and openSUSE Linux 12.1 x86_64) with gcc-4.9.2 and the new Solaris Studio 12.4 compilers. All build processes finished without errors, but I have a problem running a very small program. It works for

Re: [OMPI users] processes hang with openmpi-dev-602-g82c02b4

2014-12-24 Thread Siegmar Gross
x27;m back in my office. Thank you very much for your help, Merry Christmas, and a Happy New Year Siegmar Cheers, Gilles On 2014/12/22 22:48, Siegmar Gross wrote: Hi, today I installed openmpi-dev-602-g82c02b4 on my machines (Solaris 10 Sparc, Solaris 10 x86_64, and openSUSE Linux

[OMPI users] error building openmpi-dev-685-g881b1dc on Soalris 10

2015-01-12 Thread Siegmar Gross
Hi, today I tried to build openmpi-dev-685-g881b1dc on my machines (Solaris 10 Sparc, Solaris 10 x86_64, and openSUSE Linux 12.1 x86_64) with gcc-4.9.2 and the new Solaris Studio 12.4 compilers. I succedded on Linux but failed on both Solaris systems for both compilers with the same error. ...

[OMPI users] error building openmpi-dev-1031-g008755a with Sun C 5.13

2015-02-19 Thread Siegmar Gross
Hi, today I tried to build openmpi-dev-1031-g008755a on my machines (Solaris 10 Sparc, Solaris 10 x86_64, and openSUSE Linux 12.1 x86_64) with gcc-4.9.2 and Sun C 5.13 and got errors on all three platforms for both compilers. I used the following configure command for all platforms. ../openmpi-de

[OMPI users] error building openmpi-dev-1031-g008755a with gcc-4.9.2

2015-02-19 Thread Siegmar Gross
Hi, today I tried to build openmpi-dev-1031-g008755a on my machines (Solaris 10 Sparc, Solaris 10 x86_64, and openSUSE Linux 12.1 x86_64) with gcc-4.9.2 and Sun C 5.13 and got errors on all three platforms for both compilers. I used the following configure command for all platforms. ../openmpi-de

[OMPI users] error building openmpi-dev-1031-g008755a with gcc-4.9.2

2015-02-19 Thread Siegmar Gross
Hi, today I tried to build openmpi-dev-1031-g008755a on my machines (Solaris 10 Sparc, Solaris 10 x86_64, and openSUSE Linux 12.1 x86_64) with gcc-4.9.2 and Sun C 5.13 and got errors on all three platforms for both compilers. I used the following configure command for all platforms. ../openmpi-de

[OMPI users] error building openmpi-dev-1031-g008755a with Sun C 5.13

2015-02-19 Thread Siegmar Gross
Hi, today I tried to build openmpi-dev-1031-g008755a on my machines (Solaris 10 Sparc, Solaris 10 x86_64, and openSUSE Linux 12.1 x86_64) with gcc-4.9.2 and Sun C 5.13 and got errors on all three platforms for both compilers. I used the following configure command for all platforms. ../openmpi-de

[OMPI users] some warnings for openmpi-dev-1184-gbb22d26

2015-03-03 Thread Siegmar Gross
Hi, today I tried to build openmpi-dev-1184-gbb22d2 on my machines (Solaris 10 Sparc, Solaris 10 x86_64, and openSUSE Linux 12.1 x86_64) with gcc-4.9.2 and Sun C 5.13. Perhaps somebody is interested in some warnings that I got. tyr openmpi-dev-1184-gbb22d26-SunOS.sparc.64_gcc 57 grep warning \

[OMPI users] error building openmpi-dev-1346-gb41d2ad

2015-03-18 Thread Siegmar Gross
Hi, today I tried to build openmpi-dev-1346-gb41d2ad on my machines (Solaris 10 Sparc, Solaris 10 x86_64, and openSUSE Linux 12.1 x86_64) with gcc-4.9.2 and Sun C 5.13 and got errors on all three platforms for both compilers. I used the following configure command for all platforms for gcc. ../op

[OMPI users] Error building openmpi-dev-4010-g6c9d65c on Linux with Sun C

2016-05-06 Thread Siegmar Gross
Hi, today I tried to build openmpi-dev-4010-g6c9d65c on my machines (Solaris 10 Sparc, Solaris 10 x86_64, and openSUSE Linux 12.1 x86_64) with gcc-5.1.0 and Sun C 5.13. I was successful on most machines, but I got the following error on my Linux machine for the Sun C compiler. tyr openmpi-dev-40

[OMPI users] slot problem on "SUSE Linux, Enterprise Server 12 (x86_64)"

2016-05-07 Thread Siegmar Gross
Hi, yesterday I installed openmpi-v1.10.2-176-g9d45e07 on my "SUSE Linux Enterprise Server 12 (x86_64)" with Sun C 5.13 and gcc-5.3.0. The following programs don't run anymore. loki hello_2 112 ompi_info | grep -e "OPAL repo revision" -e "C compiler absolute" OPAL repo revision: v1.10.2

[OMPI users] problem compiling Java programs with openmpi-v1.10.2-176-g9d45e07

2016-05-07 Thread Siegmar Gross
Hi, yesterday I installed openmpi-v1.10.2-176-g9d45e07 on my "SUSE Linux Enterprise Server 12 (x86_64)" with Sun C 5.13 and gcc-5.3.0. Unfortunately I have a problem compiling Java programs. loki java 124 ompi_info | grep -e "OPAL repo revision" -e "C compiler absolute" OPAL repo revisio

[OMPI users] slot-list breaks for openmpi-v1.10.2-176-g9d45e07 on "SUSE Linux, Enterprise Server 12 (x86_64)"

2016-05-07 Thread Siegmar Gross
Hi, yesterday I installed openmpi-v1.10.2-176-g9d45e07 on my "SUSE Linux Enterprise Server 12 (x86_64)" with Sun C 5.13 and gcc-5.3.0. Unfortunately I have a problem with one of my spawn programs. loki spawn 129 ompi_info | grep -e "OPAL repo revision" -e "C compiler absolute" OPAL repo r

[OMPI users] warning message for process binding with openmpi-dev-4010-g6c9d65c

2016-05-07 Thread Siegmar Gross
Hi, yesterday I installed openmpi-dev-4010-g6c9d65c on my "SUSE Linux Enterprise Server 12 (x86_64)" with Sun C 5.13 and gcc-5.3.0. Unfortunately I get the following warning message. loki hello_1 128 ompi_info | grep -e "OPAL repo revision" -e "C compiler absolute" OPAL repo revision: de

[OMPI users] problem with Sun C 5.14 beta

2016-05-07 Thread Siegmar Gross
Hi, today I tried to install openmpi-v1.10.2-176-g9d45e07 on my "SUSE Linux Enterprise Server 12 (x86_64)" with Sun C 5.14 beta. Unfortunately "configure" breaks, because it thinks that C and C++ are link incompatible. I used the following configure command. ../openmpi-v1.10.2-176-g9d45e07/confi

Re: [OMPI users] warning message for process binding with openmpi-dev-4010-g6c9d65c

2016-05-07 Thread Siegmar Gross
ious tarball that used to work without any warning ? Cheers, Gilles On Saturday, May 7, 2016, Siegmar Gross mailto:siegmar.gr...@informatik.hs-fulda.de>> wrote: Hi, yesterday I installed openmpi-dev-4010-g6c9d65c on my "SUSE Linux Enterprise Server 12 (x86_64)" with Sun

Re: [OMPI users] [open-mpi/ompi] COMM_SPAWN broken on Solaris/v1.10 (#1569)

2016-05-07 Thread Siegmar Gross
iegmar, i was unable to reproduce the issue with one solaris 11 x86_64 VM and one linux x86_64 VM what is the minimal configuration you need to reproduce the issue ? are you able to reproduce the issue with only x86_64 nodes ? i was under the impression that solaris vs linux is the issue, but i

Re: [OMPI users] problem with Sun C 5.14 beta

2016-05-07 Thread Siegmar Gross
ot; Cheers, Gilles On Saturday, May 7, 2016, Siegmar Gross mailto:siegmar.gr...@informatik.hs-fulda.de>> wrote: Hi, today I tried to install openmpi-v1.10.2-176-g9d45e07 on my "SUSE Linux Enterprise Server 12 (x86_64)" with Sun C 5.14 beta. Unfortunately "co

[OMPI users] problem with ld for Sun C 5.14 beta and openmpi-dev-4010-g6c9d65c

2016-05-10 Thread Siegmar Gross
Hi, I tried to install openmpi-dev-4010-g6c9d65c on my "SUSE Linux Enterprise Server 12 (x86_64)" with Sun C 5.14 beta. Unfortunately "make" breaks with the following error. make[2]: Entering directory '/export2/src/openmpi-master/openmpi-dev-4010-g6c9d6 GENERATE mpi-ignore-tkr-sizeof.h GENE

Re: [OMPI users] slot problem on "SUSE Linux, Enterprise Server 12 (x86_64)"

2016-05-15 Thread Siegmar Gross
.x. My three spawn programs work with openmpi-master as well while "spawn_master" breaks on both openmpi-1.10.x and openmpi-2.x with the same failure as my hello master/slave program. Do you know when the Java problem will be solved? Kind regards Siegmar Am 15.05.2016 um 01:27

[OMPI users] problem with exceptions in Java interface

2016-05-20 Thread Siegmar Gross
Hi, I tried MPI.ERRORS_RETURN in a small Java program with Open MPI 1.10.2 and master. I get the expected behaviour, if I use a wrong value for the root process in "bcast". Unfortunately I get an MPI or Java error message if I try to broadcast more data than available. Is this intended or is it a

[OMPI users] another problem with slot-list and openmpi-v2.x-dev-1441-g402abf9

2016-05-23 Thread Siegmar Gross
Hi, I installed openmpi-v2.x-dev-1441-g402abf9 on my "SUSE Linux Enterprise Server 12 (x86_64)" with Sun C 5.14 and gcc-6.1.0. Unfortunately I don't get the expected output with "--slot-list". It's the same behaviour for both compilers. loki hello_2 114 ompi_info | grep -e "OPAL repo revision:

[OMPI users] problem with slot-list and openmpi-v2.x-dev-1441-g402abf9

2016-05-23 Thread Siegmar Gross
Hi, I installed openmpi-v2.x-dev-1441-g402abf9 on my "SUSE Linux Enterprise Server 12 (x86_64)" with Sun C 5.14 and gcc-6.1.0. Unfortunately I get a timeout error for "--slot-list". It's the same behaviour for both compilers. loki spawn 143 mpiexec -np 1 --host loki,loki,loki,nfs1,nfs1 spawn_m

[OMPI users] segmentation fault for slot-list and openmpi-1.10.3rc2

2016-05-23 Thread Siegmar Gross
Hi, I installed openmpi-1.10.3rc2 on my "SUSE Linux Enterprise Server 12 (x86_64)" with Sun C 5.13 and gcc-6.1.0. Unfortunately I get a segmentation fault for "--slot-list" for one of my small programs. loki spawn 119 ompi_info | grep -e "OPAL repo revision:" -e "C compiler absolute:" O

Re: [OMPI users] segmentation fault for slot-list and openmpi-1.10.3rc2

2016-05-24 Thread Siegmar Gross
gards Siegmar FWIW: I don’t know how many cores you have on your sockets, but if you have 6 cores/socket, then your slot-list is equivalent to “—bind-to none” as the slot-list applies to every process being launched On May 23, 2016, at 6:26 AM, Siegmar Gross wrote: Hi, I installed openmp

Re: [OMPI users] segmentation fault for slot-list and openmpi-1.10.3rc2

2016-05-24 Thread Siegmar Gross
ntation fault (11) >> [loki:24105] Signal code: Address not mapped (1) ... "mpiexec -np 1 --host loki --slot-list 0-5 a.out" breaks with a segmentation faUlt. Can I do something, so that you can find out, what happens? Kind regards Siegmar On 05/24/16 15:07, Ralph Castain wr

Re: [OMPI users] segmentation fault for slot-list and openmpi-1.10.3rc2

2016-05-24 Thread Siegmar Gross
node pc03 exited on signal 11 (Segmentation fault). -- pc03 spawn 122 Kind regards Siegmar On 05/24/16 15:44, Ralph Castain wrote: On May 24, 2016, at 6:21 AM, Siegmar Gross wrote: Hi Ralph, I copy the relevant lines to this place, so that it is easier to

Re: [OMPI users] segmentation fault for slot-list and openmpi-1.10.3rc2

2016-05-25 Thread Siegmar Gross
the child 0 of 3 on host bend001 pid 17603 Child 0 received msg: 38 1 completed MPI_Init Hello from the child 1 of 3 on host bend001 pid 17604 2 completed MPI_Init Hello from the child 2 of 3 on host bend001 pid 17605 Child 0 disconnected Child 2 disconnected Parent disconnected Child 1 disconne

Re: [OMPI users] segmentation fault for slot-list and openmpi-1.10.3rc2

2016-05-26 Thread Siegmar Gross
lo from the child 1 of 3 on host bend001 pid 17604 2 completed MPI_Init Hello from the child 2 of 3 on host bend001 pid 17605 Child 0 disconnected Child 2 disconnected Parent disconnected Child 1 disconnected 17603: exiting 17605: exiting 17601: exiting 17604: exiting $ On May 24, 2016, at 7:1

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