[QE-users] missing f orbital - Sm atom reg

2019-08-06 Thread Muthu V
Dear All, i use Sm.pbe-spdn-rrkjus_psl.1.0.0.UPF, downloaded from QE web page, for my system which contains Sm atoms. the electronic configuration of Sm contains f orbitals and the configuration is *1s2 | 2s2 2p6 | 3s2 3p6 3d10 | 4s2 4p6 4d10 5s2 5p6 4f6 6s2* when gone through this potential

[QE-users] missing f orbital - Sm atom reg

2019-08-04 Thread Muthu V
Dear Users, i am using Sm.pbe-spdn-rrkjus_psl.1.0.0.UPF for my system which contains Sm atoms. the electronic configuration of Sm contains f orbitals and the configuration is *1s2 | 2s2 2p6 | 3s2 3p6 3d10 | 4s2 4p6 4d10 5s2 5p6 4f6 6s2* when gone through this potential file i could see

[Pw_forum] Pseudo Potential selection with different methods

2017-11-11 Thread Muthu V
Dear QE Users, i like to use USPP for my system. but for some element i do not find proper PP in QE web page. for example i want to study Mn effects in MoS2 layers for this my PP selection is Mo : Mo.pbe-spn-rrkjus_psl.0.2.UPF S : S.pbe-n-rrkjus_psl.0.1.UPF Mn : Mn.pbe-sp-van.UPF

Re: [Pw_forum] problem with PWgui-6.0 (Tone Kokalj)

2017-03-09 Thread Muthu V
Hi Tone Kokalj. I am using Fedora 25 64 bit version in my i3 core Dell laptop. Looking forward to your further mails thanks - Muthu V IGCAR Kalpakkam India - On Thu, Mar 9, 2017 at 7:16 AM, Muthu V wrote: > ​Dear Tone Kokalj > Tha

Re: [Pw_forum] problem with PWgui-6.0 (Tone Kokalj)

2017-03-08 Thread Muthu V
-6.0 GUIB engine : /home/pearl/qe-6.0/pwgui-6.0/lib/Guib-0.5.1 [pearl@localhost pwgui-6.0]$ so to resolve this problem my guess is that i have to set enviro such that itk should named as Itk, but i do not how to do in case this is correct reaso

[Pw_forum] problem with PWgui-6.0

2017-03-02 Thread Muthu V
PW.X /home/pearl/qe-6.0/PWgui-6.0/modules/pw/pw.tcl}" invoked from within ".gUI0_toolbarnew.0 invoke" ("uplevel" body line 1) invoked from within "uplevel #0 [list $w invoke]" (procedure "tk::ButtonUp" line 22) invoked from within "

[Pw_forum] problem with PWgui-6.0

2017-02-28 Thread Muthu V
PW.X /home/pearl/qe-6.0/PWgui-6.0/modules/pw/pw.tcl}" invoked from within ".gUI0_toolbarnew.0 invoke" ("uplevel" body line 1) invoked from within "uplevel #0 [list $w invoke]" (procedure "tk::ButtonUp" line 22) invoked from within "

Re: [Pw_forum] Pw_forum Digest, Vol 115, Issue 22

2017-02-22 Thread Muthu V
On Wed, Feb 22, 2017 at 12:00 PM, wrote: > Subject: Re: [Pw_forum] Understanding the calculation ​Hi Yes you have update the optimized atomic coordinates and cell parameters in scf.in. here you can do it as follows open output file of relaxation process in any text editor then go to the line Fi

Re: [Pw_forum] make ph strangely stops without error in 'install' folder (Christoph Wolf (??????))

2016-08-02 Thread Muthu V
will give the same issue you are facing now (next one is pwcond-5.4.0.tar.gz) now uncompress pwcond-5.4.0.tar.gz and hit make all. QE will stop at neb-5.4.0.tar.gz So solution is extract the *tar.gz packages by yourself and try to install - Muthu V Sri Paramaka

[Pw_forum] Raman frquency calculation - reg.,

2016-07-30 Thread Muthu V
ll as raman intensity for my system. can any one help in this regard ? Thank you == Muthu V Sri Paramakalyani Colege Alwarkurichi == ___ Pw_

[Pw_forum] QE creating wrong i/p file for crystal_sg option

2016-07-01 Thread Muthu V
0.19473 0.80527 0.5 O0.80527 0.19473 0.5 my second question is 2) why QE is not giving correct atomic position if i use crystal_sg option ? cay anyone help me in this regard. with this mail i have enclosed the output file for the given inpu

[Pw_forum] Question about volume relaxation - reg

2016-06-23 Thread Muthu V
calculation QE taking celldim(i) as ( though the relaxed celldm are different) celldm(1)= 5.973424, celldm(3)= 3.889592 Why this scf is done with optimized atomic coordinate and old celldm(i)s ? what is the physics behind such a run? Thank you - Muthu V Sri Paramakalyani

Re: [Pw_forum] ​ Re: Kpoints - x coordi

2016-06-14 Thread Muthu V
(k(2,n)-k(2,n-1))**2 + & >(k(3,n)-k(3,n-1))**2 ) > > kx(n) = kx(n-1) + dxmod > > HTH, > Duc-Long > > -- > Duc-Long Nguyen > Graduate Student, Molecular Science and Technology Program, TIGP > Institute of A

[Pw_forum] pw.x warning message : IEEE_DENORMAL - reg.,

2016-06-13 Thread Muthu V
lling: IEEE_DENORMAL done* how to solve this floating point error thank you *--* *Muthu V* *Sri Paramakalyani College* *Alwarkurichi, India--* ___ Pw_forum mailing list Pw_forum@pwscf.org

[Pw_forum] Kpoints - x coordinates - reg.,

2016-06-12 Thread Muthu V
86660 1.8660 1.8660 3.2802). and the meaning of1.0 1.0 0.0 K_POINT in run_example file ( used in band calculation) Thank you ---- *Muthu V* *Sri Paramakalyani College* *Alwarkurichi* *India* ___ Pw_

[Pw_forum] problem in running pwgui-5.4.0

2016-05-07 Thread Muthu V
using yum extender and their respective version is 4.0.3 and 4.0.1. i am using fedora 23 thank you *---* *Muthu V* *Sri Paramakalyani College* *Alwarkurichi* [pearl@localhost PWgui-5.4.0]$ ./pwgui

[Pw_forum] Slab config. Input file reg

2016-03-30 Thread Muthu V
ntain the symmetry. Thank you *--* *Muthu V* *Sri Paramakalyani College* *Alwarkurichi* *India--* rut-011.vesta Description: Binary data ___ Pw_forum mailing list Pw_forum@pwsc

[Pw_forum] PWgui problem - reg.,

2016-02-11 Thread Muthu V
? why such error occurs even though proper lib is available? any suggestion will be appreciated. *---* *Muthu V* *Sri Paramakalyani College* *India---* ___ Pw_forum mailing list Pw_forum@pwscf.org http://pwscf.org/mailman/listinfo/pw_forum

[Pw_forum] PWgui installation Problem

2016-01-31 Thread Muthu V
Dear All I am trying to run Pwgui-5.3.0 in fedora 23(64 bit) OS. my system spec are Intel Core duo with 4Gb ram. when i hit ./pwgui with PWgui-5.3.0 folder i am getting the following error meassage I checked installed packages and i already have itk itcl and tk tcl in the following path /usr/lib64

[Pw_forum] Error in running pw.x for band structure with free lattice reg.,

2015-06-07 Thread Muthu V
With this email i have enclosed the script file i have used. How to reslove this problem? Thank you *-----* *​Muthu V​ * *​Madurai Kamaraj University Madurai Tamil Nadu​India​-* si De

[Pw_forum] calculation of specific capacitance - reg.,

2015-02-13 Thread Muthu V
Dear All I like to do specific capacitance analysis to support some experimental results with theoretical calculation. is it possible with DFT simulation, if yes then how to do using QE thank you in advance * *Muthu.V Madurai Kamaraj Universit**y*

[Pw_forum] wf_collect - question - reg.,

2014-12-23 Thread Muthu V
Dear Users I did not use "wf_collect" option in scf run and now i have four wf file( I used four core processor). is it possible to combine them into single file by doing any other run? Thank you **Muthu.V* *​Project Fellow​ Madurai Kamaraj Universit**y* *

[Pw_forum] Help on bulk modulus calculation of an orthorhombic LaFeO3 system

2014-10-04 Thread Muthu V
Hello Isaac you can use ev.x to do birch-muruganan fit and using this you can find bulk modulus value * *Muthu.V?Project Fellow? Madurai Kamaraj Universit**y* * -- next part -- An HTML attachment was scrub

[Pw_forum] running example si example file for band structure - reg.,

2014-07-25 Thread Muthu V
Dear QE'ians recently i installed QE-5.1 in my PC. everything went fine. i successfully got o/p for si run_example file which is in espresso/PP/examples/example01/ folder. i changed celldm(1) for si to A,B,C and cosAB, cosAC, cosBC values. as celldm(1) =10.2 so A = 5.3976=B=C and cosAB=cosBC=cos

[Pw_forum] Installing QE-5.0.3 with ifort- iotk error- reg.,

2014-06-11 Thread Muthu V
Dear QE users I tried to install QE-5.0.3 using ifort and icc compliers. the following is message printed during compilation *slave2 at slave2:~/espresso-5.0.3$ ./configure F77=ifort F90=ifort MPIF90=ifort CC=icc BLAS_LIBS="/opt/intel/mkl/lib/intel64/" LAPACK_LIBS="/opt/intel/mkl/lib/intel64/ /op

[Pw_forum] Using Intel Fortran, C++ complier- parallel, serial versions - reg.,

2014-06-04 Thread Muthu V
Dear users usually i install QE by installing FFTW lib and Fortran complier. everything goes fine with serial and parallel installation of QE. but i heard that using intel C++, fortran (ifort, icc ) compliers for intel core(i am using intel i5 core) improves performance so i decided to install a

[Pw_forum] Graphene_fixed calculation

2014-05-27 Thread Muthu V
Dr. Siddheshwar chopra you can use unit cell of graphene for SC modeling. view UC in xceysden then hit shift+n. in upcoming pup up window you can design SC. other software supporting such designing are Avogadro, VESTA * *Muthu.V ?Project FellowDept. of Theoreti

[Pw_forum] Reply to: negatives frequencies phonon calculation

2014-05-08 Thread Muthu V
Hello ZAARI I am also face the same problem in calculation el-ph coupling constant for Hesuler systems i tried in the following ways ( though problem still remain anyway for your system one may solve this problem) 1. check whether your getting -ve frequency in ph.x run 2. increse k point grid in

[Pw_forum] parallel computing -reg.

2014-04-16 Thread Muthu V
Dear all QE users thank you Dr. Axel Kohlmeyer for your valuable hint and suggestions. after your reply in pw forum I checked bit configuration of Operating system in my 3 pcs. out of three , two were in 64bit and one was in 32bit. so i changed 32bit to 64bit. After this again

[Pw_forum] parallel computing -reg.,

2014-04-03 Thread Muthu V
Dear all I have constructed Beowulf type cluster with 3PCs ( i5 processor ) . I tried to run SCF calculation for graphene with the following comment *mpirun --hostfile /home/physics/hosts -np 12 /home/physics/espresso-5.0.1/bin/pw.x -npool 12 http://grap.pw.in> > grap.pw.out* but i received

[Pw_forum] "STO Structure breaking - reg."

2014-03-09 Thread Muthu V
Dear All i thank Ari P Seitsonen, xirainbow, Paolo Giannozzi for your kind reply. i did same calculation with Ecut = 100Ry and 8x8x8 k-point mesh. but i got the same result as previous.so my convergence test seems to be correct. As Paolo mentioned i expanded 3 units in each direction i retrieved

[Pw_forum] STO Structure breaking - reg.,

2014-03-05 Thread Muthu V
Dear all I want to study H hydrogen uptake in SrTiO3 (STO). i did preliminary convergence test for STO and added atomic Hydrogen to STO Unit cell and then carried out variable volume relaxation.* below i attached Xcrysden view of input file and Output file*. i do not know why the basic structure

[Pw_forum] Xcrysden charge plot - reg.,

2014-01-31 Thread Muthu V
Dear QE'ians i drawn charge density plot using .xsf (for charge density) file. i have two questions regarding plotting with xcrysden 1. xcrysden do well. but i want to display atom only at the interested point in crystal not all atoms in whole crystal. i do not have crystal.xx package and i

[Pw_forum] band structure of Si unit cell and supercer

2014-01-22 Thread Muthu V
Dear QE users i have run band structure calculation for Si unit cell and 2x2x2 super-cell. as far as i know the both band structure should be same since 2x2x2 super-cell is = simply repeating unit cell in space twice all direction. but here i have different band structures and do not know why th

[Pw_forum] forming super cell - reg.,

2014-01-22 Thread Muthu V
Dear QE users i want to create supercell of Si and iO2 from their unitcell. i searched and there are some topics on this issue in this forum *Tone Kokalj* tone.kokalj at ijs.si *Wed Mar 21 11:24:27 CET 2012* nut it still not working for both Si and TiO2. can anyone help in this regard. ie how t

[Pw_forum] magnetic Moment calculation

2014-01-09 Thread Muthu V
Dear QE Users i plane to calculate magnetic moment for SrTiO3 and TiO2. but i don?t know how to do this. i searched it qe forum and after that i tried to scf run for TiO2 system without and with magnetic field. but i don?t know whether this is correct or can you help me in this reg., ie wher

[Pw_forum] Plotband.x Error

2013-11-13 Thread Muthu V
hello JdGa The Pro i can you send your input file *_* *Muthu.VMadurai Kamaraj University__* -- next part -- An HTML attachment was scrubbed... URL: http://pwscf.org/pipermail/pw_forum/attachments/20131113/a3533862/attachm

[Pw_forum] Re to Re: band structure drawing reg.,

2013-10-18 Thread Muthu V
thank you Bramha Pandy for your suggestion . *_ ** Muthu.V Madurai Kamaraj University __ * ** -- next part -- An HTML attachment was scrubbed... URL: http://pwscf.org/pipermail/pw_forum/attachments/20131018/3d7c7ef8/attachmen

[Pw_forum] band structure drawing reg.,

2013-10-18 Thread Muthu V
Dear QE Friends This question may be irritating ( i apology for it if it is so). in usually band structure calculation i get it without any problem. but in the band diagram i do not see the k vector symbols like X,M,G(Gamma) in x axis and in y axis it do not have any label except numbers to repres

[Pw_forum] rutile.dynGxx- reg.,

2013-10-17 Thread Muthu V
Dear QE Friends i did some calculations on phonon dispersion spectrum for tio2. while i was gone through q2r.out file i noticed that *reading force constants from file rutile.dynG1 *sentence and gone back to rutile.dynG1 file. but i found it is doubt to understand without any basic idea about it.

[Pw_forum] Suggested cutoff for wfc and rho - reg.,

2013-10-11 Thread Muthu V
Deal QE Users I have the following Pseudo Potential files for Ti. in all file what i observed is Suggested minimum cutoff for wavefunctions : 0 Ry Suggested minimum cutoff for charge density: 0 Ry why these values are zero? then for calculation what value for wfc and rho is reliable? (i

[Pw_forum] Activation - BANDS.X and DOS.X -

2013-07-01 Thread Muthu V
Hi everyone currently i am using PWgui - 5.0.2 software. in this i can not run BANDS.X and DOS.X. if i make BANDS.X ( and DOS.X) file the all option n RUN menu are inactive. i do not know how to make these active How to make these options active? Thank you *_ ** Muthu.V

[Pw_forum] Hi all

2013-06-29 Thread Muthu V
I am Muthu.v. I'm new to quantum espresso and currently try to use full utility of PWgui-5.0.2. i have installed espresso-5.0.1 in Ubuntu. But in PWgui- 5.0.2 i can not run Band.x and Dos.x. while i open new Pw.x file all options in PWgui are active but if i open either Bands.x or Dos.x the RUN o

[Pw_forum] Debugging BAND.X in PWGUI - 5.0.2 - reg.,

2013-03-17 Thread MUTHU V
i use espresso- 5.0.1 with aid of PWGUI-5.0.2 software. in this package i can run PW.X files. but if I try for other format( NEB.X BANDS.X and DOS.X). the RUN menu is not active so that I couldn't run these formats for my system. *(* for example consider in BAND.X window In the* VIEW* men

[Pw_forum] Debugging BAND.X regarding mail.

2013-03-14 Thread MUTHU V
i use espresso- 5.0.1 with aid of PWGUI-5.0.2 software. in this package i can run PW.X files. but if I try for other format( NEB.X BANDS.X and DOS.X). the RUN menu is not active so that I couldn't run these formats for my system. *(* for example consider in BAND.X window In the* VIEW* men